RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MALRD1Q5VYJ5 2156 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 STAG3L2P0CL84 134 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 STAG3L3P0CL85 134 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 PRRX1P54821 245 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 C11orf71Q6IPW1 123 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 SLC16A13Q7RTY0 426 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 TMEM144Q7Z5S9 345 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 C1QL4Q86Z23 238 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 SMIM7Q9BQ49 75 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 MIOXQ9UGB7 285 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 NAT8Q9UHE5 227 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 PPIAL4CA0A0B4J2A2 164 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 A0A1W2PN81 502 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 PPIAL4GP0DN37 164 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 IGFBP2P18065 325 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 CHRNA7P36544 502 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 ERHP84090 104 aaKnown RBP15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 PRR20EP86478 221 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 PRR20CP86479 221 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 PRR20DP86480 221 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 PRR20BP86481 221 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 PRR20AP86496 221 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 HLA-DRB5Q30154 266 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 FAM209BQ5JX69 171 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 CYP2G1PQ6ZSU1 146 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 OR8B3Q8NGG8 313 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 OR8B2Q96RD0 313 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 TMEM242Q9NWH2 141 aa15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 TPRP12270 2363 aaKnown RBP15.94■□□□□ 0.14
PCDHB11-202ENST00000624887 E7EUB6 86 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 LGALS7P47929 136 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 VMA21Q3ZAQ7 101 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 CLEC7AQ9BXN2 247 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 ZNF430Q9H8G1 570 aaPredicted RBP15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 PKD1L2Q7Z442 2459 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 COL6A6A6NMZ7 2263 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 C11orf94C9JXX5 98 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 CXorf1O96002 111 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 FABP9Q0Z7S8 132 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 ELOBQ15370 118 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 TMEM241Q24JQ0 296 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 BEND2Q8NDZ0 799 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 ABHD5Q8WTS1 349 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 RPUSD4Q96CM3 377 aaKnown RBP15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 PARLQ9H300 379 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 NIT2Q9NQR4 276 aa15.93■□□□□ 0.14
PCDHB11-202ENST00000624887 CGB1A6NKQ9 187 aa15.92■□□□□ 0.14
PCDHB11-202ENST00000624887 ARL14EPLP0DKL9 152 aa15.92■□□□□ 0.14
PCDHB11-202ENST00000624887 DLX1P56177 255 aa15.92■□□□□ 0.14
PCDHB11-202ENST00000624887 ZNF674Q2M3X9 581 aa15.92■□□□□ 0.14
PCDHB11-202ENST00000624887 SPNS3Q6ZMD2 512 aa15.92■□□□□ 0.14
PCDHB11-202ENST00000624887 SLC45A2Q9UMX9 530 aa15.92■□□□□ 0.14
PCDHB11-202ENST00000624887 BUB1B-PAK6H3BSN5 160 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 LY6HO94772 140 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 SOD3P08294 240 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 LINC00869P0C866 280 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 RHOBP62745 196 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 CD69Q07108 199 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 GAMTQ14353 236 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 MOB3BQ86TA1 216 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 LY6G5BQ8NDX9 201 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 NEU4Q8WWR8 484 aaPredicted RBP15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 TIMD4Q96H15 378 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 RITA1Q96K30 269 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 LRBAP50851 2863 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 AP4M1O00189 453 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 GATCO43716 136 aaKnown RBP15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 SLC25A17O43808 307 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 ZNF343Q6P1L6 599 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 Q8WTZ3 238 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 CACNG8Q8WXS5 425 aa15.91■□□□□ 0.14
PCDHB11-202ENST00000624887 IGKV1OR2-108A0A075B7D4 117 aa15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 IGHV3-72A0A0B4J1Y9 119 aa15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 ENSAO43768 121 aaKnown RBP15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 PDE6DO43924 150 aa15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 GPX4P36969 197 aaPredicted RBP15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 WT1-ASQ06250 92 aa15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 MRGPRG-AS1Q2M3A8 158 aa15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 SEPSECSQ9HD40 501 aaKnown RBP15.9■□□□□ 0.14
PCDHB11-202ENST00000624887 CLDN34H7C241 214 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 GNLYP22749 145 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 UQCRFS1P47985 274 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 C4orf17Q53FE4 359 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 C10orf55Q5SWW7 151 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 DTX2Q86UW9 622 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 TEX45Q8NA69 505 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 TXNDC17Q9BRA2 123 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 CTDSP1Q9GZU7 261 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 TPSG1Q9NRR2 321 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 INSIG2Q9Y5U4 225 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 URGCP-MRPS24S4R325 110 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 IGHV1-3A0A0C4DH29 117 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 LIPFP07098 398 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 NPPCP23582 126 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 RND2P52198 227 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 UBE2G2P60604 165 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 PRB3Q04118 309 aaPredicted RBP15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 MLANAQ16655 118 aa15.89■□□□□ 0.13
PCDHB11-202ENST00000624887 CLN5O75503 358 aa15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 CXCL1P09341 107 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms