RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 KIR2DL2P43627 348 aaPredicted RBP5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 TAS2R60P59551 318 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 TEX38Q6PEX7 206 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 GCSAMQ8N6F7 178 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 IDI2-AS1Q9NZ38 188 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 IL36BQ9NZH7 164 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 PIEZO2Q9H5I5 2752 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 IGHV1-18A0A0C4DH31 117 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 A0A1W2PN81 502 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 MOSP00540 346 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 CRYABP02511 175 aaKnown RBP5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 CD59P13987 128 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 CCL3L1P16619 93 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 TCTAP57738 103 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 MLANAQ16655 118 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 KRTCAP3Q53RY4 240 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 Q6ZSR3 168 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 VSTM2AQ8TAG5 236 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 RPEQ96AT9 228 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 MGST2Q99735 147 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 GP6Q9HCN6 339 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 DNAJC4Q9NNZ3 241 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 ZNRD1Q9P1U0 126 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 PPIHO43447 177 aaKnown RBP5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 COL8A1P27658 744 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 FOXA3P55318 350 aaPredicted RBP5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 OR10W1Q8NGF6 305 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 OR2T6Q8NHC8 308 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 ZCCHC14Q8WYQ9 949 aaKnown RBP5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 ZNF714Q96N38 554 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 RBM14Q96PK6 669 aaKnown RBP5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 CHRDL1Q9BU40 450 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 ASCL3Q9NQ33 180 aa5.69□□□□□ -1.5
SYNPO2-206ENST00000610556 TMSB15BA0A087X1C1 80 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 KBTBD11-OT1A0A1B0GTJ5 212 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 K7EQM0 130 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 SS18L1O75177 396 aaPredicted RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 P01737 135 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 HTR1DP28221 377 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 HINT1P49773 126 aaPredicted RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 ACSF3Q4G176 576 aaPredicted RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 SPATA45Q537H7 98 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 ZNF114Q8NC26 417 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 MDS2Q8NDY4 140 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 OR5R1Q8NH85 324 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 AGMATQ9BSE5 352 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 SCRT1Q9BWW7 348 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 ONECUT1Q9UBC0 465 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 TBL2Q9Y4P3 447 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 ADAMTS9Q9P2N4 1935 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 PPIAL4EA0A075B759 164 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 PPIAL4DF5H284 164 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 C16orf97H3BN30 126 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 PPIAL4FP0DN26 164 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 GLRXP35754 106 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 GPR6P46095 362 aaPredicted RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 C10orf55Q5SWW7 151 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 Q8NFD4 153 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 EAF1Q96JC9 268 aaPredicted RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 PPIAL4AQ9Y536 164 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 YTHDF2Q9Y5A9 579 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 INSIG2Q9Y5U4 225 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 ARFGEF3Q5TH69 2177 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 TRAV5A0A0B4J249 113 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 NPIPB11E5RHQ5 1161 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 TCF21O43680 179 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 YPEL1O60688 119 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 STAG3L2P0CL84 134 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 STAG3L3P0CL85 134 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 PYYP10082 97 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 RBPJQ06330 500 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 PRSS8Q16651 343 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 YPEL2Q96QA6 119 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 MRPL20Q9BYC9 149 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 TNFRSF19Q9NS68 423 aa5.68□□□□□ -1.5
SYNPO2-206ENST00000610556 IGKV1D-17A0A075B6S4 117 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 IFITM10A6NMD0 228 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 C15orf61A6NNL5 157 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 GFRA3O60609 400 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 LGALS4P56470 323 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ERVK11-1P61568 191 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 Q6ZR03 302 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 GBGT1Q8N5D6 347 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 FAM222BQ8WU58 562 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 PRDM13Q9H4Q3 707 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 TMEM106BQ9NUM4 274 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 GOLT1BQ9Y3E0 138 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 MALRD1Q5VYJ5 2156 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 FAM90A27PA6NNH2 459 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 NCBP2LA6PVI3 153 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 SRRM5B3KS81 715 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 RBFOX2O43251 390 aaKnown RBP eCLIP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 MT-ND6P03923 174 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ZNF883P0CG24 379 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 SAA1P0DJI8 122 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 HIST1H1EP10412 219 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 UNQ6494/PRO21346Q6UXR6 183 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms