RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CYSLTR1Q9Y271 337 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 POLR1DQ9Y2S0 133 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 RNF11Q9Y3C5 154 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 KNDC1Q76NI1 1749 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 CDK5RAP2Q96SN8 1893 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 SCN4AP35499 1836 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 IQSEC2Q5JU85 1478 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ZCCHC11Q5TAX3 1644 aaKnown RBP3.23□□□□□ -1.89
LINC00397-202ENST00000606785 BIVM-ERCC5R4GMW8 1640 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 SPAARA0A1B0GVQ0 90 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 A0A1W2PRS3 328 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 G3V3Q6 166 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 H7C1C5 153 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 K7EPK0 472 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 OR2H2O95918 312 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 TTRP02766 147 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 CTSDP07339 412 aaPredicted RBP3.23□□□□□ -1.89
LINC00397-202ENST00000606785 CNTFRP26992 372 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 OR10J1P30954 320 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 CXCL12P48061 93 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 NDUFA6P56556 154 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 LCN6P62502 163 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 PSG9Q00887 426 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 DHRS2Q13268 280 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 HMGN3Q15651 99 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 BATFQ16520 125 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 CEACAM16Q2WEN9 425 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 FBXL19-AS1Q494R0 122 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 SPANXN3Q5MJ09 141 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 BCL2L15Q5TBC7 163 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ALKAL2Q6UX46 152 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 CLEC19AQ6UXS0 136 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ZFP2Q6ZN57 461 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 C20orf196Q8IYI0 205 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 SAXO1Q8IYX7 474 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 C1orf158Q8N1D5 194 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.23□□□□□ -1.89
LINC00397-202ENST00000606785 SLC37A2Q8TED4 501 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM106AQ96A25 262 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 CLDN23Q96B33 292 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 NEURL3Q96EH8 262 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 IP6K3Q96PC2 410 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 CIB3Q96Q77 187 aaPredicted RBP3.23□□□□□ -1.89
LINC00397-202ENST00000606785 DERL3Q96Q80 235 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ULBP3Q9BZM4 244 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 OR2H1Q9GZK4 316 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM133Q9H2Q1 129 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 TRPM3Q9HCF6 1732 aaPredicted RBP3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ASF1BQ9NVP2 202 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 DNAJC27Q9NZQ0 273 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ENPP4Q9Y6X5 453 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ADAMTSL3P82987 1691 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 SLIT3O75094 1523 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ROBO3Q96MS0 1386 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 NACAE9PAV3 2078 aa3.23□□□□□ -1.89
LINC00397-202ENST00000606785 ERVK-7P63135 1459 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 NEO1Q92859 1461 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 ABCA3Q99758 1704 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 MYO5CQ9NQX4 1742 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 KDM5CP41229 1560 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 A0A1B0GV50 99 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 DUXBA0A1W2PPF3 345 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 H7BYZ3 331 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 HLA-DQB2P05538 268 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 IL3P08700 152 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 SCTP09683 121 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 FABP4P15090 132 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 HIST1H1DP16402 221 aaKnown RBP3.22□□□□□ -1.89
LINC00397-202ENST00000606785 ATF1P18846 271 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 NTF3P20783 257 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 IL3RAP26951 378 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 OPRK1P41145 380 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 POLR2HP52434 150 aaKnown RBP3.22□□□□□ -1.89
LINC00397-202ENST00000606785 GRB2P62993 217 aaKnown RBP3.22□□□□□ -1.89
LINC00397-202ENST00000606785 FABP5Q01469 135 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 MEF2CQ06413 473 aaPredicted RBP3.22□□□□□ -1.89
LINC00397-202ENST00000606785 ADIGQ0VDE8 80 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM267Q0VDI3 215 aaPredicted RBP3.22□□□□□ -1.89
LINC00397-202ENST00000606785 PDGFRLQ15198 375 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 LGALSLQ3ZCW2 172 aaPredicted RBP3.22□□□□□ -1.89
LINC00397-202ENST00000606785 GLYATL3Q5SZD4 288 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 ZNF684Q5T5D7 378 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 Q5W150 140 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 ZNF773Q6PK81 442 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 ALKAL1Q6UXT8 129 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 FOXI2Q6ZQN5 318 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 OOSP2Q86WS3 158 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM86AQ8N2M4 240 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 Q8N9L7 120 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM229BQ8NBD8 167 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 OR11G2Q8NGC1 345 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 OR11H6Q8NGC7 330 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 OR51T1Q8NGJ9 327 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 MFSD8Q8NHS3 518 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 CIRBP-AS1Q8TBR5 109 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 SLAMF6Q96DU3 332 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
LINC00397-202ENST00000606785 ADAT1Q9BUB4 502 aaKnown RBP3.22□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM70Q9BUB7 260 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms