RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 OR1P1Q8NH06 330 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 GATAD1Q8WUU5 269 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 MOB3AQ96BX8 217 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 CMTM3Q96MX0 182 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 C20orf24Q9BUV8 137 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 MAP6D1Q9H9H5 199 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 EHFQ9NZC4 300 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 SMPXQ9UHP9 88 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 OR51B2Q9Y5P1 312 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 KRASP01116 189 aa13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 RPA2P15927 270 aa13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 LPAR6P43657 344 aa13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 EWSR1Q01844 656 aaKnown RBP eCLIP13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 ODF3L2Q3SX64 289 aa13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 OR6F1Q8NGZ6 308 aa13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 CSTL1Q9H114 145 aa13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 UBQLN2Q9UHD9 624 aa13.19□□□□□ -0.3
SHKBP1-227ENST00000602011 CTSGP08311 255 aa13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 ADMP35318 185 aa13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 Q56UQ5 140 aa13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 ZNF2Q9BSG1 426 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 HINT2Q9BX68 163 aa13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 MFFQ9GZY8 342 aa13.18□□□□□ -0.3
SHKBP1-227ENST00000602011 A0A087WXM4 84 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 LOC100506127A0A0U1RQW1 187 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 MPTX1A8MV57 137 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 K7EIM0 57 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 GPR31O00270 319 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 CTSDP07339 412 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 CLEC2LP0C7M8 214 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 NAT1P18440 290 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 MFAP4P55083 255 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 LGALS9CQ6DKI2 356 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 OR5H2Q8NGV7 314 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 FCAMRQ8WWV6 532 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 TMEM14BQ9NUH8 114 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 ANAPC10Q9UM13 185 aa13.17□□□□□ -0.3
SHKBP1-227ENST00000602011 TRAV14DV4A0A0A6YYC5 116 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 IGHV7-4-1A0A0J9YVY3 117 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 RLN1P04808 185 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 RFX2P48378 723 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 TCTAP57738 103 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 UBAC2Q8NBM4 344 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 TMEM116Q8NCL8 245 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 PHLDA1Q8WV24 401 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 RHPN1-AS1Q9BWJ2 59 aa13.16□□□□□ -0.3
SHKBP1-227ENST00000602011 F8W735 103 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 CHEK1O14757 476 aa13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 RPL35AP18077 110 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 MFAP2P55001 183 aa13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 UBE2NLQ5JXB2 153 aa13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 TMEM69Q5SWH9 247 aa13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 GINS3Q9BRX5 216 aa13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 VCX3AQ9NNX9 186 aa13.15□□□□□ -0.3
SHKBP1-227ENST00000602011 C15orf61A6NNL5 157 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 YIF1AO95070 293 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 IFNA4P05014 189 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 PRSS3P35030 304 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 G6PCP35575 357 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 ERHP84090 104 aaKnown RBP13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 OR4A16Q8NH70 328 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 RNF2Q99496 336 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 RARRES2Q99969 163 aa13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 NXF2Q9GZY0 626 aaKnown RBP13.14□□□□□ -0.31
SHKBP1-227ENST00000602011 DFFBO76075 338 aa13.13□□□□□ -0.31
SHKBP1-227ENST00000602011 PMP2P02689 132 aa13.13□□□□□ -0.31
SHKBP1-227ENST00000602011 EIF4EP06730 217 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-227ENST00000602011 FCER2P06734 321 aa13.13□□□□□ -0.31
SHKBP1-227ENST00000602011 SLC25A46Q96AG3 418 aa13.13□□□□□ -0.31
SHKBP1-227ENST00000602011 RNF167Q9H6Y7 350 aa13.13□□□□□ -0.31
SHKBP1-227ENST00000602011 NSG2Q9Y328 171 aa13.13□□□□□ -0.31
SHKBP1-227ENST00000602011 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 MEIS3P1A6NDR6 274 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 I3L2K1 104 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 DEDDO75618 318 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 NPBWR1P48145 328 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 UCP3P55916 312 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 TSPAN5P62079 268 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 FAM90A2PQ658T7 463 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 H2BFWTQ7Z2G1 175 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 C11orf68Q9H3H3 251 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 PCLOQ9Y6V0 5065 aa13.12□□□□□ -0.31
SHKBP1-227ENST00000602011 SMIM31A0A1B0GVY4 71 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 ZNF207O43670 478 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 GNG7O60262 68 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 TAS2R20P59543 309 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 PRCDQ00LT1 54 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 TMEM41BQ5BJD5 291 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
SHKBP1-227ENST00000602011 TMEM231Q9H6L2 316 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms