RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 CCSO14618 274 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 NXPH3O95157 252 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 RPLP1P05386 114 aaKnown RBP14.66□□□□□ -0.06
CCDC9-205ENST00000600117 OR13C7P0DN81 318 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 PF4V1P10720 104 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 KLK9Q2XQG4 91 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 CXorf66Q5JRM2 361 aaPredicted RBP14.66□□□□□ -0.06
CCDC9-205ENST00000600117 OR2C3Q8N628 320 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 UXS1Q8NBZ7 420 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 OR1S1Q8NH92 325 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 OR10C1Q96KK4 312 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 PDCD10Q9BUL8 212 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 PLEKHA3Q9HB20 300 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 KLK9Q9UKQ9 250 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 ALG5Q9Y673 324 aa14.66□□□□□ -0.06
CCDC9-205ENST00000600117 TCRBV4S1A1TA0A5B7 111 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 ADARB2-AS1A8MUL3 147 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 PRH1P02810 166 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 RAB9AP51151 201 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 TNFRSF9Q07011 255 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 OR4D5Q8NGN0 318 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 MS4A10Q96PG2 267 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 FANCD2OSQ96PS1 177 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 CACFD1Q9UGQ2 172 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 COL7A1Q02388 2944 aa14.65□□□□□ -0.06
CCDC9-205ENST00000600117 TRBV9A0A0B4J1U6 114 aa14.64□□□□□ -0.07
CCDC9-205ENST00000600117 C11orf87Q6NUJ2 197 aa14.64□□□□□ -0.07
CCDC9-205ENST00000600117 ZBTB8BQ8NAP8 495 aaPredicted RBP14.64□□□□□ -0.07
CCDC9-205ENST00000600117 SLA2Q9H6Q3 261 aa14.64□□□□□ -0.07
CCDC9-205ENST00000600117 ZNF355PQ9NSJ1 428 aa14.64□□□□□ -0.07
CCDC9-205ENST00000600117 DMRT1Q9Y5R6 373 aa14.64□□□□□ -0.07
CCDC9-205ENST00000600117 NOTCH3Q9UM47 2321 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 FAM90A26D6RGX4 464 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 TRGV3P03979 118 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 HOXA1P49639 335 aaPredicted RBP14.63□□□□□ -0.07
CCDC9-205ENST00000600117 MFAP2P55001 183 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 RPL23AP62750 156 aaKnown RBP14.63□□□□□ -0.07
CCDC9-205ENST00000600117 DEFA5Q01523 94 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 IAH1Q2TAA2 248 aaPredicted RBP14.63□□□□□ -0.07
CCDC9-205ENST00000600117 TMEM65Q6PI78 240 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 MRPL41Q8IXM3 137 aaKnown RBP14.63□□□□□ -0.07
CCDC9-205ENST00000600117 ZNF491Q8N8L2 437 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 RBKSQ9H477 322 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 ZFP57Q9NU63 452 aa14.63□□□□□ -0.07
CCDC9-205ENST00000600117 TSSC4Q9Y5U2 329 aaPredicted RBP14.63□□□□□ -0.07
CCDC9-205ENST00000600117 F11RQ9Y624 299 aaKnown RBP14.63□□□□□ -0.07
CCDC9-205ENST00000600117 IGLV11-55A0A075B6I3 123 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 C13orf42A0A1B0GVH6 325 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 CEBPZOSA8MTT3 80 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 TSPAN15O95858 294 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 TPPP2P59282 170 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 ID3Q02535 119 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 C18orf65Q6ZTR6 163 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 NDUFA11Q86Y39 141 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 ZNF114Q8NC26 417 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 P2RX4Q99571 388 aa14.62□□□□□ -0.07
CCDC9-205ENST00000600117 RNASE2P10153 161 aaKnown RBP14.61□□□□□ -0.07
CCDC9-205ENST00000600117 CDX1P47902 265 aaPredicted RBP14.61□□□□□ -0.07
CCDC9-205ENST00000600117 ERHP84090 104 aaKnown RBP14.61□□□□□ -0.07
CCDC9-205ENST00000600117 RHOGP84095 191 aa14.61□□□□□ -0.07
CCDC9-205ENST00000600117 BSXQ3C1V8 233 aa14.61□□□□□ -0.07
CCDC9-205ENST00000600117 KHDC1LQ5JSQ8 128 aa14.61□□□□□ -0.07
CCDC9-205ENST00000600117 ENY2Q9NPA8 101 aa14.61□□□□□ -0.07
CCDC9-205ENST00000600117 C5orf51A6NDU8 294 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 FAM25EA8MYX2 175 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 GOSR2O14653 212 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 SSNA1O43805 119 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 OR2J3O76001 311 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 DEFA4P12838 97 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 HIST1H1BP16401 226 aaKnown RBP14.6□□□□□ -0.07
CCDC9-205ENST00000600117 IL15RAQ13261 267 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 PVRIGQ6DKI7 326 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 GSG1LQ6UXU4 331 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 OR1P1Q8NH06 330 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 DTD1Q8TEA8 209 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 UBE2E2Q96LR5 201 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 C2orf50Q96LR7 162 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 GNB4Q9HAV0 340 aa14.6□□□□□ -0.07
CCDC9-205ENST00000600117 A0A1W2PRX2 142 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 FAM223BA6NKX1 122 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 NDUFB8O95169 186 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 SIX6O95475 246 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 NKX2-1P43699 371 aaPredicted RBP14.59□□□□□ -0.07
CCDC9-205ENST00000600117 BEAN1Q3B7T3 259 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 FAM223AQ8IWN6 122 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 NECAP1Q8NC96 275 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 MAGT1Q9H0U3 335 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 HEYLQ9NQ87 328 aaPredicted RBP14.59□□□□□ -0.07
CCDC9-205ENST00000600117 GSKIPQ9P0R6 139 aa14.59□□□□□ -0.07
CCDC9-205ENST00000600117 SYNGR2O43760 224 aa14.58□□□□□ -0.08
CCDC9-205ENST00000600117 MED6O75586 246 aa14.58□□□□□ -0.08
CCDC9-205ENST00000600117 POLR2GP62487 172 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCDC9-205ENST00000600117 NSUN5P1Q3KNT7 163 aa14.58□□□□□ -0.08
CCDC9-205ENST00000600117 OR1L6Q8NGR2 347 aa14.58□□□□□ -0.08
CCDC9-205ENST00000600117 TMEM170AQ8WVE7 144 aa14.58□□□□□ -0.08
CCDC9-205ENST00000600117 USMG5Q96IX5 58 aa14.58□□□□□ -0.08
CCDC9-205ENST00000600117 FBXL7Q9UJT9 491 aa14.58□□□□□ -0.08
CCDC9-205ENST00000600117 A0A0G2JLM5 398 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 IGHV3-11P01762 117 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 MBPP02686 304 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms