RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 WDR61Q9GZS3 305 aaKnown RBP1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 EFCAB1Q9HAE3 211 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 IL36BQ9NZH7 164 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 SLC22A13Q9Y226 551 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 ZFHX2Q9C0A1 2572 aaPredicted RBP1.09□□□□□ -2.24
PPP4R1-227ENST00000583988 RTTNQ86VV8 2226 aa1.09□□□□□ -2.24
PPP4R1-227ENST00000583988 MAST2Q6P0Q8 1798 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 A0A0J9YY10 115 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 TRBV10-2A0A0K0K1G8 114 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 A0A1B0GX78 115 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 GGT3PA6NGU5 568 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 FABP5P3A8MUU1 101 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 TMEM114B3SHH9 223 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 INMT-MINDY4F8WBC2 141 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 KPNA3O00505 521 aaPredicted RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 CHP2O43745 196 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 CRYZL1O95825 349 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 IGHV3-7P01780 117 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 CRPP02741 224 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 PRM2P04554 102 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H1TP22492 207 aaPredicted RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H2BOP23527 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HLA-DMBP28068 263 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H2BBP33778 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 G6PCP35575 357 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 AQP4P55087 323 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H2BDP58876 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 SNRPD2P62316 118 aaKnown RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H2BCP62807 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 CCL20P78556 96 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 RPL18Q07020 188 aaKnown RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 FADDQ13158 208 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 SRSF6Q13247 344 aaKnown RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 EDDM3AQ14507 147 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 GUK1Q16774 197 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST2H2BEQ16778 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 Q1T7F1 81 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 ACOT6Q3I5F7 207 aaPredicted RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 IBA57Q5T440 356 aaKnown RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 RPL22L1Q6P5R6 122 aaKnown RBP1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 TMEM86BQ8N661 226 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 ANKRD29Q8N6D5 301 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 ZNF565Q8N9K5 539 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H2BHQ93079 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 BORCS7Q96B45 105 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H2BNQ99877 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H2BMQ99879 126 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 TRIM4Q9C037 500 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 TIMM22Q9Y584 194 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 PCDH15Q96QU1 1955 aa1.08□□□□□ -2.24
PPP4R1-227ENST00000583988 NCOA1Q15788 1441 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 IFNA10P01566 189 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 PPBPP02775 128 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 TFPTP0C1Z6 253 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 METTL15P1P0C7V9 234 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 FXYD2P54710 66 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 AP3S2P59780 193 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 HBA1P69905 142 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 REEP5Q00765 189 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 MOGQ16653 247 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 FAM27BQ5VT28 67 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 ALKAL1Q6UXT8 129 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 OR6V1Q8N148 313 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 CHMP6Q96FZ7 201 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 BTF3L4Q96K17 158 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 C8orf76Q96K31 380 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 TMEM56-RWDD3S4R434 201 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 RALGAPA2Q2PPJ7 1873 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 NUP155O75694 1391 aa1.07□□□□□ -2.24
PPP4R1-227ENST00000583988 KIF13BQ9NQT8 1826 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 IGKV3-7A0A075B6H7 116 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 TRAV9-1A0A075B6T8 112 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 TMEM210A6NLX4 147 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 PIRO00625 290 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 ORC5O43913 435 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 TTRP02766 147 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 TCRBP04435 133 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 TRGC1P0CF51 173 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 RPL5P46777 297 aaKnown RBP1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 EIF2B2P49770 351 aaKnown RBP1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 HIST1H3AP68431 136 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 CCL7P80098 99 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 MRPS25P82663 173 aaKnown RBP1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 MRPS15P82914 257 aaKnown RBP1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 H3F3AP84243 136 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 KCNJ8Q15842 424 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 SPANXN3Q5MJ09 141 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 AADACL3Q5VUY0 350 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 DHFR2Q86XF0 187 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 KRT222Q8N1A0 295 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 OR5B17Q8NGF7 314 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 OR13C4Q8NGS5 318 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 OR2T4Q8NH00 348 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 C11orf40Q8WZ69 217 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 PPP1R2P1Q96PQ5 205 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 GINS4Q9BRT9 223 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 CCDC90BQ9GZT6 254 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 CMTM6Q9NX76 183 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms