RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	LYZL2	Q7Z4W2	148 aa		18.32	■□□□□ 0.52
ERBB2-209	ENST00000578709	C20orf85	Q9H1P6	137 aa		18.32	■□□□□ 0.52
ERBB2-209	ENST00000578709	CACNG5	Q9UF02	275 aa		18.32	■□□□□ 0.52
ERBB2-209	ENST00000578709	FBXL7	Q9UJT9	491 aa		18.32	■□□□□ 0.52
ERBB2-209	ENST00000578709	DMRT1	Q9Y5R6	373 aa		18.32	■□□□□ 0.52
ERBB2-209	ENST00000578709	C9orf170	A2RU37	121 aa		18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	INS-IGF2	F8WCM5	200 aa		18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	HSPB1	P04792	205 aa	Known RBP	18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	OR8U8	P0C7N1	319 aa		18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	MECP2	P51608	486 aa	Known RBP	18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	C15orf32	Q32M92	178 aa		18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	OR2C3	Q8N628	320 aa		18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	F11R	Q9Y624	299 aa	Known RBP	18.31	■□□□□ 0.52
ERBB2-209	ENST00000578709	IGHV4OR15-8	A0A075B7B6	117 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709		A0A087WW49	117 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	LINC01619	G3V211	115 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	IFNA17	P01571	189 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	OR4E1	P0C645	316 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	ANXA7	P20073	488 aa	Known RBP	18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	RAB25	P57735	213 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	PDLIM3	Q53GG5	364 aa	Predicted RBP	18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	OR52E5	Q8NH55	327 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	DPF1	Q92782	380 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	PDCD10	Q9BUL8	212 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	PLEKHA3	Q9HB20	300 aa		18.3	■□□□□ 0.52
ERBB2-209	ENST00000578709	CYB5B	O43169	146 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	NDUFB8	O95169	186 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	HLA-A	P01891	365 aa	Known RBP	18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	SULT1A3	P0DMM9	295 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	SULT1A4	P0DMN0	295 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	SPCS3	P61009	180 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	DHRS2	Q13268	280 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	EXOSC2	Q13868	293 aa	Known RBP	18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	LYG2	Q86SG7	212 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	ZNF114	Q8NC26	417 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	RCC1L	Q96I51	464 aa	Known RBP	18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	RANGRF	Q9HD47	186 aa	Predicted RBP	18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	CACFD1	Q9UGQ2	172 aa		18.29	■□□□□ 0.52
ERBB2-209	ENST00000578709	FAM240B	A0A1B0GVZ2	78 aa		18.28	■□□□□ 0.52
ERBB2-209	ENST00000578709	MFAP2	P55001	183 aa		18.28	■□□□□ 0.52
ERBB2-209	ENST00000578709	FAM209B	Q5JX69	171 aa		18.28	■□□□□ 0.52
ERBB2-209	ENST00000578709	OR1L6	Q8NGR2	347 aa		18.28	■□□□□ 0.52
ERBB2-209	ENST00000578709	OR1P1	Q8NH06	330 aa		18.28	■□□□□ 0.52
ERBB2-209	ENST00000578709	NUDT15	Q9NV35	164 aa		18.28	■□□□□ 0.52
ERBB2-209	ENST00000578709	PEF1	Q9UBV8	284 aa	Known RBP	18.28	■□□□□ 0.52
ERBB2-209	ENST00000578709	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	ANKRD34B	A5PLL1	514 aa		18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	DUS4L	O95620	317 aa	Known RBP	18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	ERH	P84090	104 aa	Known RBP	18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	SMCO1	Q147U7	214 aa		18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	C4orf46	Q504U0	113 aa		18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	SPINK9	Q5DT21	86 aa		18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	THYN1	Q9P016	225 aa		18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709	TMED3	Q9Y3Q3	217 aa		18.27	■□□□□ 0.52
ERBB2-209	ENST00000578709		A0A1B0GU03	582 aa		18.26	■□□□□ 0.51
ERBB2-209	ENST00000578709	SLC25A6	P12236	298 aa		18.26	■□□□□ 0.51
ERBB2-209	ENST00000578709	SAMD5	Q5TGI4	173 aa		18.26	■□□□□ 0.51
ERBB2-209	ENST00000578709	SLC25A24	Q6NUK1	477 aa		18.26	■□□□□ 0.51
ERBB2-209	ENST00000578709	TRAV6	A0A075B6T7	132 aa		18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	TRBV12-3	P01733	135 aa		18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	IGLL1	P15814	213 aa		18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	ZP3	P21754	424 aa		18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	SLURP1	P55000	103 aa		18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	EEF1AKMT3	Q96AZ1	226 aa		18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	CXorf58	Q96LI9	332 aa		18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	MCRIP2	Q9BUT9	160 aa	Known RBP	18.25	■□□□□ 0.51
ERBB2-209	ENST00000578709	H2AFB2	P0C5Z0	115 aa		18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	HOXD3	P31249	432 aa	Predicted RBP	18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	HOXA1	P49639	335 aa	Predicted RBP	18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	COQ8A	Q8NI60	647 aa		18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	VN1R17P	Q8TDU5	208 aa		18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	DCUN1D4	Q92564	292 aa		18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	CCDC140	Q96MF4	163 aa		18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	ENY2	Q9NPA8	101 aa		18.24	■□□□□ 0.51
ERBB2-209	ENST00000578709	TRBV7-1	A0A0A6YYK4	115 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	MFSD2B	A6NFX1	497 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709		G3V4G9	280 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	PITX3	O75364	302 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	OXLD1	Q5BKU9	147 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	ENKUR	Q8TC29	256 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	MITD1	Q8WV92	249 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	DLX4	Q92988	240 aa	Predicted RBP	18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	HSPB7	Q9UBY9	170 aa		18.23	■□□□□ 0.51
ERBB2-209	ENST00000578709	BMPR1B	O00238	502 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	HOXB5	P09067	269 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	SNCA	P37840	140 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	DEFA1	P59665	94 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	DEFA3	P59666	94 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	TNFRSF9	Q07011	255 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	BSX	Q3C1V8	233 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	GGNBP1	Q5YKI7	109 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	PVRIG	Q6DKI7	326 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	DUSP18	Q8NEJ0	188 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709	ZNF502	Q8TBZ5	544 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709		S4R3C0	116 aa		18.22	■□□□□ 0.51
ERBB2-209	ENST00000578709		K7EIM0	57 aa		18.21	■□□□□ 0.51
ERBB2-209	ENST00000578709	IGHV3-23	P01764	117 aa		18.21	■□□□□ 0.51
ERBB2-209	ENST00000578709	RNASE2	P10153	161 aa	Known RBP	18.21	■□□□□ 0.51
ERBB2-209	ENST00000578709	KLF5	Q13887	457 aa	Predicted RBP	18.21	■□□□□ 0.51
ERBB2-209	ENST00000578709	KPRP	Q5T749	579 aa	Predicted RBP	18.21	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms