RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ACSM6Q6P461 480 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 TEPPQ6URK8 271 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 MBD3L1Q8WWY6 194 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 KCNIP2Q9NS61 270 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 WNK2Q9Y3S1 2297 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 AKR1C1Q04828 323 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 CCDC28AQ8IWP9 274 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 RNASEH2CQ8TDP1 164 aaKnown RBP23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 NPFFO15130 113 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 GPX4P36969 197 aaPredicted RBP23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 OPRK1P41145 380 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 RAB31Q13636 194 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 GUK1Q16774 197 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 C17orf50Q8WW18 174 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 CACNG8Q8WXS5 425 aa23.28■■□□□ 1.32
CTDNEP1-208ENST00000573600 CENPVL3A0A0U1RRI6 287 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 IGLC7A0M8Q6 106 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 SAA4P35542 130 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 GNB1P62873 340 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 CD69Q07108 199 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 PEA15Q15121 130 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 ZNF114Q8NC26 417 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 P2RX4Q99571 388 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 MGST2Q99735 147 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 SRSF8Q9BRL6 282 aaKnown RBP23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 TMEM231Q9H6L2 316 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 BEX4Q9NWD9 120 aaPredicted RBP23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 FAM96BQ9Y3D0 163 aa23.27■■□□□ 1.32
CTDNEP1-208ENST00000573600 MSMBP08118 114 aa23.26■■□□□ 1.31
CTDNEP1-208ENST00000573600 PAX6P26367 422 aa23.26■■□□□ 1.31
CTDNEP1-208ENST00000573600 ACOT6Q3I5F7 207 aaPredicted RBP23.26■■□□□ 1.31
CTDNEP1-208ENST00000573600 RCC1LQ96I51 464 aaKnown RBP23.26■■□□□ 1.31
CTDNEP1-208ENST00000573600 A0A1B0GV50 99 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 BRS3P32247 399 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 TMEM144Q7Z5S9 345 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 Q8N6K4 173 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 OR10G4Q8NGN3 311 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 OR10G9Q8NGN4 311 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 OR10G7Q8NGN6 311 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 AJUBAQ96IF1 538 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 B4DSR2 109 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 M6PRP20645 277 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 CD24P25063 80 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 ZNF726P1Q15940 193 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 SRSF12Q8WXF0 261 aaKnown RBP23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 GGTLC1Q9BX51 225 aa23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 EIF5A2Q9GZV4 153 aaKnown RBP23.25■■□□□ 1.31
CTDNEP1-208ENST00000573600 FCN1O00602 326 aa23.24■■□□□ 1.31
CTDNEP1-208ENST00000573600 FAM106CPP0CH98 169 aa23.24■■□□□ 1.31
CTDNEP1-208ENST00000573600 RPP25LQ8N5L8 163 aaKnown RBP23.24■■□□□ 1.31
CTDNEP1-208ENST00000573600 C1orf159Q96HA4 380 aa23.24■■□□□ 1.31
CTDNEP1-208ENST00000573600 SCRT1Q9BWW7 348 aa23.24■■□□□ 1.31
CTDNEP1-208ENST00000573600 SMDT1Q9H4I9 107 aa23.24■■□□□ 1.31
CTDNEP1-208ENST00000573600 CYB5BO43169 146 aa23.23■■□□□ 1.31
CTDNEP1-208ENST00000573600 C5orf64Q2M2E5 130 aa23.23■■□□□ 1.31
CTDNEP1-208ENST00000573600 PVRIGQ6DKI7 326 aa23.23■■□□□ 1.31
CTDNEP1-208ENST00000573600 LRRC75A-AS1Q8N1F1 130 aa23.23■■□□□ 1.31
CTDNEP1-208ENST00000573600 ACTR3CQ9C0K3 210 aaPredicted RBP23.23■■□□□ 1.31
CTDNEP1-208ENST00000573600 SLC39A9Q9NUM3 307 aa23.23■■□□□ 1.31
CTDNEP1-208ENST00000573600 LRRK2Q5S007 2527 aa23.23■■□□□ 1.31
CTDNEP1-208ENST00000573600 CTXND1A0A1B0GTU2 59 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 TEX22C9J3V5 150 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 TMEM11P17152 192 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 CCL20P78556 96 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 SLC35E1Q96K37 410 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 MED13LQ71F56 2210 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 ABCA2Q9BZC7 2435 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 CNIH1O95406 144 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 KRTAP10-9P60411 292 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 SSBP2P81877 361 aaPredicted RBP23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 GAMTQ14353 236 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 SLC16A13Q7RTY0 426 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 PXMP4Q9Y6I8 212 aa23.22■■□□□ 1.31
CTDNEP1-208ENST00000573600 IGHV1-69DA0A0B4J2H0 117 aa23.21■■□□□ 1.31
CTDNEP1-208ENST00000573600 MAP1LC3B2A6NCE7 125 aa23.21■■□□□ 1.31
CTDNEP1-208ENST00000573600 IGHV1-69P01742 117 aa23.21■■□□□ 1.31
CTDNEP1-208ENST00000573600 LCN15Q6UWW0 184 aa23.21■■□□□ 1.31
CTDNEP1-208ENST00000573600 PIP4P2Q8N4L2 257 aa23.21■■□□□ 1.31
CTDNEP1-208ENST00000573600 MAP1LC3BQ9GZQ8 125 aa23.21■■□□□ 1.31
CTDNEP1-208ENST00000573600 C1RLQ9NZP8 487 aa23.21■■□□□ 1.31
CTDNEP1-208ENST00000573600 RBFOX3A6NFN3 312 aa23.2■■□□□ 1.3
CTDNEP1-208ENST00000573600 APOC3P02656 99 aa23.2■■□□□ 1.3
CTDNEP1-208ENST00000573600 REG1AP05451 166 aa23.2■■□□□ 1.3
CTDNEP1-208ENST00000573600 GATA3P23771 443 aa23.2■■□□□ 1.3
CTDNEP1-208ENST00000573600 RPL29P47914 159 aaKnown RBP23.2■■□□□ 1.3
CTDNEP1-208ENST00000573600 OR1P1Q8NH06 330 aa23.2■■□□□ 1.3
CTDNEP1-208ENST00000573600 SEC11CQ9BY50 192 aa23.2■■□□□ 1.3
CTDNEP1-208ENST00000573600 TRAV20A0A0B4J274 112 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 F8W036 122 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 CORTO00230 105 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 AREGP15514 252 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 DEFB113Q30KQ7 82 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 C10orf91Q5T1B1 145 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 ETFRF1Q6IPR1 90 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 SSX7Q7RTT5 188 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 MIC13Q5XKP0 118 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 PLXNB1O43157 2135 aa23.19■■□□□ 1.3
CTDNEP1-208ENST00000573600 NCBP2LA6PVI3 153 aaKnown RBP23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 TSPAN9O75954 239 aa23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 SFTA3P0C7M3 94 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms