RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 HEYLQ9NQ87 328 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 A0A0G2JLM5 398 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 C5orf51A6NDU8 294 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 M0QZ24 198 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 CCSO14618 274 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 SSNA1O43805 119 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 MED6O75586 246 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 OR2J3O76001 311 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 CDX1P47902 265 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 C2orf68Q2NKX9 166 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 IAH1Q2TAA2 248 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 OR2C3Q8N628 320 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 ZNF491Q8N8L2 437 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 HIPK2Q9H2X6 1198 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 THYN1Q9P016 225 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 GSKIPQ9P0R6 139 aa11.31□□□□□ -0.6
NPLOC4-209ENST00000572760 WRBO00258 174 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 BRI3O95415 125 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 RHOGP84095 191 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 TNFRSF9Q07011 255 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 TATDN3Q17R31 274 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 AARDQ4LEZ3 155 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 GSG1LQ6UXU4 331 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 UBE2E2Q96LR5 201 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 OR5B12Q96R08 314 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 HSPB7Q9UBY9 170 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 FBXL7Q9UJT9 491 aa11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 F11RQ9Y624 299 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-209ENST00000572760 TENM1Q9UKZ4 2725 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 FAM223BA6NKX1 122 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 MPTX1A8MV57 137 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 PITX3O75364 302 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 SCGB1D2O95969 90 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 IGHV3-11P01762 117 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 DEFA5Q01523 94 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 ATP5G2Q06055 141 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 FAM223AQ8IWN6 122 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 ZBTB8BQ8NAP8 495 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 OR4F17Q8NGA8 305 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 DTD1Q8TEA8 209 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 USMG5Q96IX5 58 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 OR10C1Q96KK4 312 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 OR4F4Q96R69 305 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 RBKSQ9H477 322 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 ALG5Q9Y673 324 aa11.29□□□□□ -0.6
NPLOC4-209ENST00000572760 GOSR2O14653 212 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 OXA1LQ15070 435 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 PDLIM3Q53GG5 364 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 C8orf86Q6ZUL3 223 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 C2orf50Q96LR7 162 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 FANCD2OSQ96PS1 177 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 P2RX4Q99571 388 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
NPLOC4-209ENST00000572760 IGLV11-55A0A075B6I3 123 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 TRBV9A0A0B4J1U6 114 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 ADARB2-AS1A8MUL3 147 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 INS-IGF2F8WCM5 200 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 SYNGR2O43760 224 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 NDUFB8O95169 186 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 IFNA10P01566 189 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 IAPPP10997 89 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 HTR2BP41595 481 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 KIAA0141Q14154 515 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 C15orf32Q32M92 178 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 NOXA1Q86UR1 476 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 ZNF114Q8NC26 417 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 DPF1Q92782 380 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 MISP3Q96FF7 219 aa11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 CIB3Q96Q77 187 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-209ENST00000572760 C7orf66A4D0T2 115 aa11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 PF4P02776 101 aa11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 EXOSC2Q13868 293 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 OR4D5Q8NGN0 318 aa11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 EEF1AKMT3Q96AZ1 226 aa11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 PINX1Q96BK5 328 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 CXorf58Q96LI9 332 aa11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 PAIP2BQ9ULR5 123 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-209ENST00000572760 ANKRD34BA5PLL1 514 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 CORTO00230 105 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 SIX6O95475 246 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 LY86O95711 162 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 NPY1RP25929 384 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 MFAP2P55001 183 aa11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 POLR2GP62487 172 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 RPP30P78346 268 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-209ENST00000572760 ID3Q02535 119 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms