RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 TMEM56Q96MV1 263 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 PBDC1Q9BVG4 233 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SEC11CQ9BY50 192 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 HES7Q9BYE0 225 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SMIM3Q9BZL3 60 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 TMEM222Q9H0R3 208 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 DEFB127Q9H1M4 99 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 UQCC1Q9NVA1 299 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 TREM2Q9NZC2 230 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 RCL1Q9Y2P8 373 aaKnown RBP2.72□□□□□ -1.97
UBR1-211ENST00000569971 CARHSP1Q9Y2V2 147 aaKnown RBP2.72□□□□□ -1.97
UBR1-211ENST00000569971 KPTNQ9Y664 436 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 TMEM56-RWDD3S4R434 201 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 EML6Q6ZMW3 1958 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 BRWD1Q9NSI6 2320 aa2.71□□□□□ -1.97
UBR1-211ENST00000569971 PHF3Q92576 2039 aaKnown RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 COL27A1Q8IZC6 1860 aaPredicted RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 KMT2EQ8IZD2 1858 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 CDH23Q9H251 3354 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 IGHV7-81A0A0B4J1V7 117 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 A0A1W2PNU3 283 aaPredicted RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 ARGFXA6NJG6 315 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 TMEM210A6NLX4 147 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 UMAD1C9J7I0 102 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 ATP6V1G2-DDX39BF2Z307 99 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 H0Y980 276 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 DNASE2O00115 360 aaPredicted RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 TOR1AO14656 332 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 NUPL2O15504 423 aaKnown RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 PITX3O75364 302 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 IGHV3-23P01764 117 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 SCTP09683 121 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 SFTA3P0C7M3 94 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 OR8U9P0C7N5 309 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 SLC25A6P12236 298 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 RCC1P18754 421 aaPredicted RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 TUBG1P23258 451 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 LPAR6P43657 344 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 KCNJ3P48549 501 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 AKR1C2P52895 323 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 PPP1CBP62140 327 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 HLA-DRB3P79483 266 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 FLI1Q01543 452 aaPredicted RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 AKR1C1Q04828 323 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 BAXQ07812 192 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 ZNF616Q08AN1 781 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 OR8G1Q15617 311 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 HIKESHIQ53FT3 197 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 C10orf91Q5T1B1 145 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 C1orf185Q5T7R7 199 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 OR2T2Q6IF00 324 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 MDP1Q86V88 176 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 STX12Q86Y82 276 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 SELENOHQ8IZQ5 122 aaKnown RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 PUSL1Q8N0Z8 303 aaKnown RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 FAM58AQ8N1B3 248 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 GAPTQ8N292 157 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 C6orf223Q8N319 242 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 TMEM252Q8N6L7 170 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 CD177Q8N6Q3 437 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 ZNF525Q8N782 197 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 LFNGQ8NES3 379 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 OR11L1Q8NGX0 322 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 TP53RKQ96S44 253 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 NRIP2Q9BQI9 281 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 GINS3Q9BRX5 216 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 ADAT1Q9BUB4 502 aaKnown RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 EIF5A2Q9GZV4 153 aaKnown RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 ARV1Q9H2C2 271 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 OR51I2Q9H344 312 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 SMDT1Q9H4I9 107 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 PLEKHF2Q9H8W4 249 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 ZDHHC11Q9H8X9 412 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 RPS10P5Q9NQ39 176 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 TUBG2Q9NRH3 451 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 C19orf12Q9NSK7 152 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 KCNIP1Q9NZI2 227 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 MTCH1Q9NZJ7 389 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 TRAPPC2LQ9UL33 140 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 RBM7Q9Y580 266 aaKnown RBP2.71□□□□□ -1.98
UBR1-211ENST00000569971 SMAD5-AS1Q9Y6J3 95 aa2.71□□□□□ -1.98
UBR1-211ENST00000569971 ASXL3Q9C0F0 2248 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 CACNA1EQ15878 2313 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 ZNF318Q5VUA4 2279 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 RANBP2P49792 3224 aaKnown RBP2.7□□□□□ -1.98
UBR1-211ENST00000569971 TRAV17A0A0B4J275 112 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 TMEM30CPA0ZSE6 113 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 NKX2-6A6NCS4 301 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 SIRPB1O00241 398 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 PHOX2AO14813 284 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 AGPAT2O15120 278 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 SYNGR1O43759 233 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 SSSCA1O60232 199 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 PGLYRP1O75594 196 aaPredicted RBP2.7□□□□□ -1.98
UBR1-211ENST00000569971 SERF1AO75920 110 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 IFNA5P01569 189 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 IGHV3-48P01763 117 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 HBE1P02100 147 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 CD5P06127 495 aa2.7□□□□□ -1.98
UBR1-211ENST00000569971 MUC1P15941 1255 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms