RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 B3GALT5-AS1P59052 145 aa8.78□□□□□ -1
USB1-212ENST00000566082 S100A7AQ86SG5 101 aa8.78□□□□□ -1
USB1-212ENST00000566082 ZADH2Q8N4Q0 377 aa8.78□□□□□ -1
USB1-212ENST00000566082 NPIPB3Q92617 1050 aa8.78□□□□□ -1
USB1-212ENST00000566082 GAL3ST2Q9H3Q3 398 aa8.78□□□□□ -1
USB1-212ENST00000566082 RNF7Q9UBF6 113 aa8.78□□□□□ -1
USB1-212ENST00000566082 IGHV3-72A0A0B4J1Y9 119 aa8.78□□□□□ -1
USB1-212ENST00000566082 TEX50A0A1B0GTY4 177 aa8.78□□□□□ -1
USB1-212ENST00000566082 LINC00473A8K010 186 aa8.78□□□□□ -1
USB1-212ENST00000566082 NDUFB3O43676 98 aa8.78□□□□□ -1
USB1-212ENST00000566082 CCL8P80075 99 aa8.78□□□□□ -1
USB1-212ENST00000566082 RPL24P83731 157 aaKnown RBP8.78□□□□□ -1
USB1-212ENST00000566082 RELBQ01201 579 aa8.78□□□□□ -1
USB1-212ENST00000566082 BPIFA4PQ86YQ2 179 aa8.78□□□□□ -1
USB1-212ENST00000566082 ZNF114Q8NC26 417 aa8.78□□□□□ -1
USB1-212ENST00000566082 VSTM2AQ8TAG5 236 aa8.78□□□□□ -1
USB1-212ENST00000566082 SCRT1Q9BWW7 348 aa8.78□□□□□ -1
USB1-212ENST00000566082 SNAI2O43623 268 aa8.78□□□□□ -1
USB1-212ENST00000566082 NUDT3O95989 172 aa8.78□□□□□ -1
USB1-212ENST00000566082 REG1AP05451 166 aa8.78□□□□□ -1
USB1-212ENST00000566082 BTF3P20290 206 aaKnown RBP8.78□□□□□ -1
USB1-212ENST00000566082 HOXA4Q00056 320 aaPredicted RBP8.78□□□□□ -1
USB1-212ENST00000566082 TMEM177Q53S58 311 aa8.78□□□□□ -1
USB1-212ENST00000566082 SLC25A34Q6PIV7 304 aa8.78□□□□□ -1
USB1-212ENST00000566082 BHLHA15Q7RTS1 189 aaPredicted RBP8.78□□□□□ -1
USB1-212ENST00000566082 PERPQ96FX8 193 aa8.78□□□□□ -1
USB1-212ENST00000566082 LPAR2Q9HBW0 351 aa8.78□□□□□ -1
USB1-212ENST00000566082 LOC389332A0A1B0GUA5 103 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 A0A1W2PRD5 423 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 A0A1W2PRF3 423 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 A0A1W2PRM7 423 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 TNFRSF1AP19438 455 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 Q6P435 159 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 UNQ5815/PRO19632Q6UWF5 114 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 GTF2H5Q6ZYL4 71 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 NEU1Q99519 415 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 DCAF16Q9NXF7 216 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 C15orf62A8K5M9 175 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 C21orf140B9A014 251 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 K7ERU9 68 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 RBFOX2O43251 390 aaKnown RBP eCLIP8.77□□□□□ -1.01
USB1-212ENST00000566082 FOXH1O75593 365 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 FAM87AP0C7U9 286 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 DUTP33316 252 aaKnown RBP8.77□□□□□ -1.01
USB1-212ENST00000566082 DIRC2Q96SL1 478 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 TRAV3A0A0B4J244 114 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 FBLL1A6NHQ2 334 aaKnown RBP8.77□□□□□ -1.01
USB1-212ENST00000566082 PPOXP50336 477 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 RPL8P62917 257 aaKnown RBP8.77□□□□□ -1.01
USB1-212ENST00000566082 MGST2Q99735 147 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 METRNQ9UJH8 293 aa8.77□□□□□ -1.01
USB1-212ENST00000566082 YTHDF2Q9Y5A9 579 aaKnown RBP8.77□□□□□ -1.01
USB1-212ENST00000566082 COL6A3P12111 3177 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 OR4C46A6NHA9 309 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 PLA2G5P39877 138 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 LRRC10Q5BKY1 277 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 PROK2Q9HC23 129 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 ASCL3Q9NQ33 180 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 HSPB8Q9UJY1 196 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 TRAV9-1A0A075B6T8 112 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.76□□□□□ -1.01
USB1-212ENST00000566082 S100A7P31151 101 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 ZNF146Q15072 292 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 OR4F17Q8NGA8 305 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 PMCHL2Q9BQD1 86 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 MUC3AQ02505 3323 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 TRBV6-6A0A0A6YYG2 114 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 COX7A1P24310 79 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 GFRA1P56159 465 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 VWA1Q6PCB0 445 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 C12orf54Q6X4T0 127 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 COLCA1Q6ZS62 124 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 STXBP6Q8NFX7 210 aa8.76□□□□□ -1.01
USB1-212ENST00000566082 IGKV3D-15A0A087WSY6 115 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 K7ESF4 209 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 MOSP00540 346 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 CECR9P0C854 216 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 Q6ZWC4 215 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 C1orf210Q8IVY1 113 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 MUC15Q8N387 334 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 OR9G1Q8NH87 305 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 FAM222BQ8WU58 562 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 SFXN3Q9BWM7 321 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 GNB1LQ9BYB4 327 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 ZNF430Q9H8G1 570 aaPredicted RBP8.75□□□□□ -1.01
USB1-212ENST00000566082 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 IGHV1-2P23083 117 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 Q0VFX4 171 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 TBR1Q16650 682 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 WDR82Q6UXN9 313 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 RAB37Q96AX2 223 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 ALKBH7Q9BT30 221 aaPredicted RBP8.75□□□□□ -1.01
USB1-212ENST00000566082 TNFRSF19Q9NS68 423 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 CLEC5AQ9NY25 188 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 DLL1O00548 723 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 SLC25A17O43808 307 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 HYPMO75409 117 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms