RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 IGKV1D-33P01593 117 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 IGKV1-33P01594 117 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 NR2C2APQ86WQ0 139 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 FER1L6-AS1Q8NA97 138 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 TMEM170AQ8WVE7 144 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 MRPL20Q9BYC9 149 aaKnown RBP10.64□□□□□ -0.71
SYNM-203ENST00000560674 SP9P0CG40 484 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 GPR183P32249 361 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 RTN4RL2Q86UN3 420 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 FAM90A1Q86YD7 464 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 C2orf88Q9BSF0 95 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 SERF1AO75920 110 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 TRBV6-7A0A0A0MS04 114 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 PRR19A6NJB7 356 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 TMEM262E9PQX1 116 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 HAX1O00165 279 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 FAM201AQ5SY85 155 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 FDCSPQ8NFU4 85 aa10.64□□□□□ -0.71
SYNM-203ENST00000560674 ATXN7O15265 892 aaPredicted RBP10.63□□□□□ -0.71
SYNM-203ENST00000560674 LINC01560Q8TB33 94 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 NRN1Q9NPD7 142 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 IGHV2OR16-5A0A0B4J2B6 119 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 GATA2P23769 480 aaPredicted RBP10.63□□□□□ -0.71
SYNM-203ENST00000560674 PSG7Q13046 419 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 ARPC1AQ92747 370 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 SEMA5BQ9P283 1151 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 IQCF6A8MYZ5 107 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 TMEM144Q7Z5S9 345 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 PPP1R27Q86WC6 154 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 GDF15Q99988 308 aa10.63□□□□□ -0.71
SYNM-203ENST00000560674 FOXD3Q9UJU5 478 aaPredicted RBP10.63□□□□□ -0.71
SYNM-203ENST00000560674 COL4A5P29400 1685 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.62□□□□□ -0.71
SYNM-203ENST00000560674 H3BRM9 83 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 CCL20P78556 96 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 LY6G6FQ5SQ64 297 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 PLPPR1Q8TBJ4 325 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 CCL19Q99731 98 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 OTORQ9NRC9 128 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 F8VVB4 439 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 F8VWA3 439 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 ADMP35318 185 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 NUTF2P61970 127 aaKnown RBP10.62□□□□□ -0.71
SYNM-203ENST00000560674 FAM27E3Q08E93 113 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 FAM169BQ8N8A8 192 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 FBLN5Q9UBX5 448 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 LINC00312Q9Y6C7 94 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 SRSF3P84103 164 aaKnown RBP10.62□□□□□ -0.71
SYNM-203ENST00000560674 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
SYNM-203ENST00000560674 LINC00587B1AMM8 73 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 RNASE7Q9H1E1 156 aaKnown RBP10.62□□□□□ -0.71
SYNM-203ENST00000560674 LAMTOR2Q9Y2Q5 125 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 A0A0G2JLM5 398 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 EFEMP2O95967 443 aa10.62□□□□□ -0.71
SYNM-203ENST00000560674 ZNF837Q96EG3 531 aaPredicted RBP10.62□□□□□ -0.71
SYNM-203ENST00000560674 NDUFA3O95167 84 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 A0A0G2JMM0 328 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 A0A1W2PPB8 328 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 A0A1W2PRS3 328 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 KIR3DP1A8MWS1 328 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 APOMO95445 188 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 NUDT11Q96G61 164 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 TBX6O95947 436 aaPredicted RBP10.61□□□□□ -0.71
SYNM-203ENST00000560674 C1QTNF9P0C862 333 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 IGKV1-13P0DP09 117 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 SPTBP11277 2137 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 UPK2O00526 184 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 SAA1P0DJI8 122 aaPredicted RBP10.61□□□□□ -0.71
SYNM-203ENST00000560674 IGHV1-2P23083 117 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 SLC25A28Q96A46 364 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
SYNM-203ENST00000560674 COL11A1P12107 1806 aaPredicted RBP10.6□□□□□ -0.71
SYNM-203ENST00000560674 LEPP41159 167 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 LTBP1Q14766 1721 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 LINC00271P0C7V0 271 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 NUP37Q8NFH4 326 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 C5orf30Q96GV9 206 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 SAA2-SAA4A0A096LPE2 208 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 FGF16O43320 207 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
SYNM-203ENST00000560674 SAA2P0DJI9 122 aaPredicted RBP10.6□□□□□ -0.71
SYNM-203ENST00000560674 PAX1P15863 534 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 CLEC19AQ6UXS0 136 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 DUX3Q96PT4 197 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 DICER1Q9UPY3 1922 aaKnown RBP10.6□□□□□ -0.71
SYNM-203ENST00000560674 OTOFQ9HC10 1997 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 C15orf61A6NNL5 157 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 GNG5P63218 68 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 YPEL1O60688 119 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 TYMSP04818 313 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
SYNM-203ENST00000560674 BSPH1Q075Z2 132 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 NEU4Q8WWR8 484 aaPredicted RBP10.6□□□□□ -0.71
SYNM-203ENST00000560674 YPEL2Q96QA6 119 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 VCX2Q9H322 139 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 MRPS18CQ9Y3D5 142 aaKnown RBP10.6□□□□□ -0.71
SYNM-203ENST00000560674 PIKFYVEQ9Y2I7 2098 aa10.6□□□□□ -0.71
SYNM-203ENST00000560674 TMEM50AO95807 157 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms