RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 NABP2Q9BQ15 211 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 MRPL20Q9BYC9 149 aaKnown RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 MROQ9BYG7 248 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 CHST5Q9GZS9 411 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 FBXL15Q9H469 300 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 RIBC2Q9H4K1 309 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 RGCCQ9H4X1 137 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 REEP1Q9H902 201 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 SLC25A22Q9H936 323 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 EFCAB1Q9HAE3 211 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 HMG20AQ9NP66 347 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 ZC4H2Q9NQZ6 224 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 TAS2R4Q9NYW5 299 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 IL20Q9NYY1 176 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 IDI2-AS1Q9NZ38 188 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 LRP1BQ9NZR2 4599 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 CD300AQ9UGN4 299 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 NUFIP1Q9UHK0 495 aaKnown RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 MINOS1-NBL1R4GNA1 71 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 PKHD1P08F94 4074 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 FAT2Q9NYQ8 4349 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 APOBP04114 4563 aaKnown RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 HSPG2P98160 4391 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 TRAV41A0A0B4J266 112 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 KBTBD11-OT1A0A1B0GTJ5 212 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PNMA8CA0A1B0GUJ8 204 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 HELTA6NFD8 242 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF670-ZNF695F2Z2N8 137 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 LINC01619G3V211 115 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 I3L521 148 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 J3QLW9 94 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 GABRPO00591 440 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 GEMIN2O14893 280 aaKnown RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 DEFB4AO15263 64 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 NOS1APO75052 506 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 IGHG2P01859 326 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 HLA-AP01891 365 aaKnown RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 KRT8P05787 483 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 CD7P09564 240 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 CCL1P22362 96 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 SOX6P35712 828 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PPP1CCP36873 323 aaKnown RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 LEPP41159 167 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 DAPP51397 102 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 DYNLT3P51808 116 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 GTF2A1P52655 376 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ATP1B3P54709 279 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 SYNJ2BPP57105 145 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 SMIM11AP58511 58 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 TPPP2P59282 170 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 GNGT1P63211 74 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PITPNAQ00169 270 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF616Q08AN1 781 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PDZK1IP1Q13113 114 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 RIPK1Q13546 671 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 CDK5R1Q15078 307 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PLGLAQ15195 96 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 RPL39P5Q59GN2 51 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 C1orf100Q5SVJ3 147 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 FAM27D1Q5T7N8 215 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 METTL21CQ5VZV1 264 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 XAF1Q6GPH4 301 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 CTRB2Q6GPI1 263 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 OR52W1Q6IF63 320 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 RPL13AP3Q6NVV1 102 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 FAM131AQ6UXB0 335 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 HEPN1Q6WQI6 88 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 CROCCP2Q86T23 111 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 SPATA24Q86W54 205 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF679Q8IYX0 411 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PGAM4Q8N0Y7 254 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 Q8N6K4 173 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ZFP41Q8N8Y5 198 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 OR5T1Q8NG75 326 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 OR9G1Q8NH87 305 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF596Q8TC21 504 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 TNFAIP8L1Q8WVP5 186 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 CANT1Q8WVQ1 401 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 TSEN15Q8WW01 171 aaKnown RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 TCTEX1D2Q8WW35 142 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 RGP1Q92546 391 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ARL11Q969Q4 196 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 RDH12Q96NR8 316 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 OPALINQ96PE5 141 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PDCD1LG2Q9BQ51 273 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 TM2D3Q9BRN9 247 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 OSBPL10Q9BXB5 764 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ANKRD60Q9BZ19 345 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 GPR61Q9BZJ8 451 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 PKIBQ9C010 78 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ABCG5Q9H222 651 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 GAL3ST2Q9H3Q3 398 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 BANF2Q9H503 90 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 TUBA4BQ9H853 241 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 GORASP2Q9H8Y8 452 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ABCB9Q9NP78 766 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF355PQ9NSJ1 428 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 SMPD3Q9NY59 655 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-219ENST00000556413 RASL12Q9NYN1 266 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms