RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 NQO2P16083 231 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 CBLN1P23435 193 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 ARL3P36405 182 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 ELLP55199 621 aaPredicted RBP4.98□□□□□ -1.61
SLIRP-203ENST00000554074 OR2B8PP59922 312 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 FAM106AQ4KMX7 169 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 AADACL3Q5VUY0 350 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 CLEC19AQ6UXS0 136 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 HSD17B13Q7Z5P4 300 aaPredicted RBP4.98□□□□□ -1.61
SLIRP-203ENST00000554074 OR4C16Q8NGL9 310 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 IL17DQ8TAD2 202 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 MARC2Q969Z3 335 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 ATP6V0BQ99437 205 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 HIPK2Q9H2X6 1198 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 HRASLSQ9HDD0 168 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 COMMD9Q9P000 198 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 THYN1Q9P016 225 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 COPZ2Q9P299 210 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 CSMD3Q7Z407 3707 aa4.98□□□□□ -1.61
SLIRP-203ENST00000554074 TRAV25A0A0B4J276 109 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 M0QYG6 137 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 UPK2O00526 184 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 CYB5BO43169 146 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 TNFSF12O43508 249 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 PGLYRP1O75594 196 aaPredicted RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 CD7P09564 240 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 C8orf88P0DMB2 117 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 DEFA4P12838 97 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 IL7P13232 177 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 PGAM2P15259 253 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 FXYD4P59646 89 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 UBE2MP61081 183 aaKnown RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 RBMS2Q15434 407 aaKnown RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 ANKRD55Q3KP44 614 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 SCGB2B2Q4G0G5 96 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 RNASE12Q5GAN4 147 aaKnown RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 ZNF57Q68EA5 555 aaPredicted RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 ZNF818PQ6ZRF7 136 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 SSX9Q7RTT3 188 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 SLC16A13Q7RTY0 426 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 ZNF502Q8TBZ5 544 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 VN1R17PQ8TDU5 208 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 GPHA2Q96T91 129 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 SDHCQ99643 169 aaPredicted RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 QTRT1Q9BXR0 403 aaKnown RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 COMMD5Q9GZQ3 224 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 FXYD6Q9H0Q3 95 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 PLEKHA3Q9HB20 300 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 TMEM140Q9NV12 185 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 MCUBQ9NWR8 336 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 CACFD1Q9UGQ2 172 aa4.97□□□□□ -1.61
SLIRP-203ENST00000554074 C14orf166Q9Y224 244 aaKnown RBP4.97□□□□□ -1.61
SLIRP-203ENST00000554074 RBMY1BA6NDE4 496 aaKnown RBP4.96□□□□□ -1.62
SLIRP-203ENST00000554074 RBMY1EA6NEQ0 496 aaKnown RBP4.96□□□□□ -1.62
SLIRP-203ENST00000554074 MFSD2BA6NFX1 497 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 OR11H12B2RN74 326 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 UPK1BO75841 260 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 S1PR2O95136 353 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 HLA-AP01891 365 aaKnown RBP4.96□□□□□ -1.62
SLIRP-203ENST00000554074 CLEC3BP05452 202 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 RBMY1DP0C7P1 496 aaKnown RBP4.96□□□□□ -1.62
SLIRP-203ENST00000554074 TRAPPC2P0DI81 140 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 TRAPPC2BP0DI82 140 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 MYOD1P15172 320 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 F2RP25116 425 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 DEFA1P59665 94 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 DEFA3P59666 94 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 ERVK-16P61578 105 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 SRPXP78539 464 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 DHODHQ02127 395 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 BAK1Q16611 211 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 GUCA2BQ16661 112 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 ZFAND6Q6FIF0 208 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 MZT2BQ6NZ67 158 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 SPSB3Q6PJ21 355 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 C19orf35Q6ZS72 473 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM61Q8N0U2 210 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 DEFB125Q8N687 156 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 UXS1Q8NBZ7 420 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 DMBX1Q8NFW5 382 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 OR4D10Q8NGI6 311 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 OR51S1Q8NGJ8 323 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 OR1L8Q8NGR8 309 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 OR51H1Q8NH63 302 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 WDR89Q96FK6 387 aaPredicted RBP4.96□□□□□ -1.62
SLIRP-203ENST00000554074 GALNT14Q96FL9 552 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 ZNF436Q9C0F3 470 aaPredicted RBP4.96□□□□□ -1.62
SLIRP-203ENST00000554074 SRD5A3Q9H8P0 318 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 MRPL27Q9P0M9 148 aaKnown RBP4.96□□□□□ -1.62
SLIRP-203ENST00000554074 MLXQ9UH92 298 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 GPR132Q9UNW8 380 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 KCNIP3Q9Y2W7 256 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 UFC1Q9Y3C8 167 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 LYSTQ99698 3801 aa4.96□□□□□ -1.62
SLIRP-203ENST00000554074 TRAV3A0A0B4J244 114 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 TEX50A0A1B0GTY4 177 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 ZNF320A2RRD8 509 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 LYRM1O43325 122 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 NDUFB6O95139 128 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms