RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
SHMT2-208ENST00000553868 TAAR5O14804 337 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 CD24P25063 80 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 PAX6P26367 422 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 CNTFRP26992 372 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 ATP5IP56385 69 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-208ENST00000553868 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 SSX3Q99909 188 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 HINT2Q9BX68 163 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 SACSQ9NZJ4 4579 aa11.48□□□□□ -0.57
SHMT2-208ENST00000553868 BTBD17A6NE02 478 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 FAM24AA6NFZ4 105 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 BCL2L11O43521 198 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 TMEM50AO95807 157 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 RPL27AP46776 148 aaKnown RBP11.47□□□□□ -0.57
SHMT2-208ENST00000553868 PAX9P55771 341 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 ERHP84090 104 aaKnown RBP11.47□□□□□ -0.57
SHMT2-208ENST00000553868 EWSR1Q01844 656 aaKnown RBP eCLIP11.47□□□□□ -0.57
SHMT2-208ENST00000553868 OPCMLQ14982 345 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 TNXAQ16473 311 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 SPANXN5Q5MJ07 72 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 HSD17B13Q7Z5P4 300 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-208ENST00000553868 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
SHMT2-208ENST00000553868 RASL11BQ9BPW5 248 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 ARPC5LQ9BPX5 153 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 SRSF8Q9BRL6 282 aaKnown RBP11.47□□□□□ -0.57
SHMT2-208ENST00000553868 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 NDUFA4L2Q9NRX3 87 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 U3KQ87 197 aa11.47□□□□□ -0.57
SHMT2-208ENST00000553868 MSGN1A6NI15 193 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 M0QZK8 103 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 CNIH1O95406 144 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 IFNA10P01566 189 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 VDAC2P45880 294 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-208ENST00000553868 SULT1A1P50225 295 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 RAB11AP62491 216 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 GNB1P62873 340 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 EIF5AP63241 154 aaKnown RBP11.46□□□□□ -0.57
SHMT2-208ENST00000553868 HBG1P69891 147 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 HBG2P69892 147 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 SPINK9Q5DT21 86 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 C16orf82Q7Z2V1 217 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 OR5R1Q8NH85 324 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 RBM14Q96PK6 669 aaKnown RBP11.46□□□□□ -0.57
SHMT2-208ENST00000553868 PLSCR3Q9NRY6 295 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 MOB4Q9Y3A3 225 aa11.46□□□□□ -0.57
SHMT2-208ENST00000553868 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 H3BP45 60 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 H3BUX3 64 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 CLDN34H7C241 214 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 FGF16O43320 207 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 OPN1MWP04001 364 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 SNCAP37840 140 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 HTR2BP41595 481 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
SHMT2-208ENST00000553868 PJVKQ0ZLH3 352 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 DEFB112Q30KQ8 113 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 KPRPQ5T749 579 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-208ENST00000553868 ZNF562Q6V9R5 426 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 SLC25A33Q9BSK2 321 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 GON7Q9BXV9 100 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 PAIP2BQ9ULR5 123 aaKnown RBP11.45□□□□□ -0.58
SHMT2-208ENST00000553868 BOLA1Q9Y3E2 137 aa11.45□□□□□ -0.58
SHMT2-208ENST00000553868 BORCS7-ASMTA0A0B4J1R7 106 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 A6NDX4 124 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 DFFBO76075 338 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 CA2P00918 260 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 HLA-DRB1P01911 266 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 NPY1RP25929 384 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 MRGPRG-AS1Q2M3A8 158 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 TMEM14EPQ6UXP3 125 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 Q8N9W7 124 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 OR10P1Q8NGE3 313 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 OR1S2Q8NGQ3 325 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 PIFOQ8TCI5 191 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 SRSF12Q8WXF0 261 aaKnown RBP11.44□□□□□ -0.58
SHMT2-208ENST00000553868 PINX1Q96BK5 328 aaKnown RBP11.44□□□□□ -0.58
SHMT2-208ENST00000553868 TNFRSF19Q9NS68 423 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 PLXNB1O43157 2135 aa11.44□□□□□ -0.58
SHMT2-208ENST00000553868 MDFIC2A0A1B0GVS7 189 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 TSPAN9O75954 239 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 CST7O76096 145 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 METTL15P1P0C7V9 234 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 MYOD1P15172 320 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 TMEM267Q0VDI3 215 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-208ENST00000553868 ZNF266Q14584 549 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 FXYD3Q14802 87 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 ATP6V1FQ16864 119 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 C10orf55Q5SWW7 151 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 SAMD5Q5TGI4 173 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 STPG2Q8N412 459 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 OR4C12Q96R67 309 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms