RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 FABP1P07148 127 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 SULT1A3P0DMM9 295 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 SULT1A4P0DMN0 295 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 PPIBP23284 216 aaKnown RBP1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 PSMB8P28062 276 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 CCR2P41597 374 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 ZNF80P51504 273 aaPredicted RBP1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 MEF2BQ02080 365 aaPredicted RBP1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 AGTRAPQ6RW13 159 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 LYZL1Q6UWQ5 148 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 Q6ZS52 159 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 ACOT12Q8WYK0 555 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 CCDC90BQ9GZT6 254 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 RNF122Q9H9V4 155 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 HHLA3Q9XRX5 114 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 SIPA1L1O43166 1804 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 COL4A4P53420 1690 aaPredicted RBP1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 ROCK1Q13464 1354 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 ZNF638Q14966 1978 aaKnown RBP1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 TRAV4A0A0B4J268 109 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 IRGMA1A4Y4 181 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 ATG12O94817 140 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 IFNA1P01562 189 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 IFNA10P01566 189 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 MSMBP08118 114 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 MSNP26038 577 aaKnown RBP1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 CRYBA4P53673 196 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 CDC42P60953 191 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 GNG3P63215 75 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 KISS1Q15726 138 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 PABPC1L2AQ5JQF8 200 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 ZNF705AQ6ZN79 300 aaPredicted RBP1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 GINS3Q9BRX5 216 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 VCX3BQ9H321 246 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 BOLA2Q9H3K6 86 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 PYCARDQ9ULZ3 195 aa1.94□□□□□ -2.1
LSM6P2-201ENST00000552208 ADGRB3O60242 1522 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 TRAV41A0A0B4J266 112 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 C3orf84H3BNL1 204 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 TRAPPC2LH3BP13 241 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 PGRMC1O00264 195 aaKnown RBP1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 DEFA4P12838 97 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 ERP29P30040 261 aaKnown RBP1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 ZNF90Q03938 601 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 SPANXN3Q5MJ09 141 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 Q6Q795 121 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 SLC35E3Q7Z769 313 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 OR5J2Q8NH18 312 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 TERB2Q8NHR7 220 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 SLC25A40Q8TBP6 338 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 SELENOSQ9BQE4 189 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 TVP23BQ9NYZ1 205 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 NAT8Q9UHE5 227 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 SMPXQ9UHP9 88 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 WDR90Q96KV7 1748 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 UNC13AQ9UPW8 1703 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 TRPM6Q9BX84 2022 aa1.93□□□□□ -2.1
LSM6P2-201ENST00000552208 TRBV19A0A075B6N1 114 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 IGKV3D-11A0A0A0MRZ8 115 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 TRAV38-1A0A0B4J264 116 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 H7C2G1 150 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 HMGB3O15347 200 aaKnown RBP1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 CREBL2O60519 120 aaPredicted RBP1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 SMIM17P0DL12 118 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 EMP1P54849 157 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 DEFA3P59666 94 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 SUPT4H1P63272 117 aaKnown RBP1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 ARHGAP11BQ3KRB8 267 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 SMIM20Q8N5G0 67 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 RPP25LQ8N5L8 163 aaKnown RBP1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 FAM172AQ8WUF8 416 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 ANP32BQ92688 251 aaKnown RBP1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 C2orf50Q96LR7 162 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 CHST6Q9GZX3 395 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 TRABDQ9H4I3 376 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 PRNDQ9UKY0 176 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 UTP11Q9Y3A2 253 aaKnown RBP1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 RALGAPA2Q2PPJ7 1873 aa1.92□□□□□ -2.1
LSM6P2-201ENST00000552208 MIA2Q96PC5 1412 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 NYNRINQ9P2P1 1898 aaKnown RBP1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 IGHV1-18A0A0C4DH31 117 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 C19orf84I3L1E1 186 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 IGKV1-16P04430 117 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 SPI1P17947 270 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 SRIP30626 198 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 ATP5G3P48201 142 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 TAS2R41P59536 307 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 DR1Q01658 176 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 HES1Q14469 280 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 ZNF791Q3KP31 576 aaPredicted RBP1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 BRD3OSQ6XYD6 125 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 OR52R1Q8NGF1 315 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 PFN4Q8NHR9 129 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 DNAJC30Q96LL9 226 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 SS18L2Q9UHA2 77 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 UFC1Q9Y3C8 167 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms