RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 COQ8AQ8NI60 647 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM167AQ8TBQ9 72 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 ZNF431Q8TF32 576 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 LSM10Q969L4 123 aaKnown RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 RRNAD1Q96FB5 475 aaKnown RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 SEC22AQ96IW7 307 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 OR2A7Q96R45 310 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 PHB2Q99623 299 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 RASL11BQ9BPW5 248 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 SLC25A33Q9BSK2 321 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 COA4Q9NYJ1 87 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 BET1LQ9NYM9 111 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 METTL1Q9UBP6 276 aaKnown RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 SIGLEC9Q9Y336 463 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 TMED3Q9Y3Q3 217 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 MMP24Q9Y5R2 645 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 SVEP1Q4LDE5 3571 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 A0A1B0GU03 582 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 C7orf66A4D0T2 115 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SRRM4A7MD48 611 aaKnown RBP4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SLC25A17O43808 307 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 TSPAN9O75954 239 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SNAPC5O75971 98 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 KBTBD11O94819 623 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 NDUFA7O95182 113 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 KRASP01116 189 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 IGKV1-39P01597 117 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 IGKV1-5P01602 117 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 IGKV1D-39P04432 117 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 CRYBA1P05813 215 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SAA1P0DJI8 122 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SLC25A6P12236 298 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SPNP16150 400 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 VDAC1P21796 283 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 F2RL1P55085 397 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 RPL8P62917 257 aaKnown RBP4.52□□□□□ -1.69
SCAF11-213ENST00000550629 PLGLAQ15195 96 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 LY6EQ16553 131 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 PRSS8Q16651 343 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 ANKRD55Q3KP44 614 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 TMEM268Q5VZI3 342 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 OR4A47Q6IF82 309 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 TMEM88Q6PEY1 159 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 ZNF562Q6V9R5 426 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 H2BFWTQ7Z2G1 175 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 HSD17B13Q7Z5P4 300 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-213ENST00000550629 FOXRED2Q8IWF2 684 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 MMD2Q8IY49 270 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SELENOHQ8IZQ5 122 aaKnown RBP4.52□□□□□ -1.69
SCAF11-213ENST00000550629 DMBX1Q8NFW5 382 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 SRSF8Q9BRL6 282 aaKnown RBP4.52□□□□□ -1.69
SCAF11-213ENST00000550629 HIPK2Q9H2X6 1198 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 C16orf95Q9H693 158 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 TMEM14BQ9NUH8 114 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 FKBP11Q9NYL4 201 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 PRNDQ9UKY0 176 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 ZNF257Q9Y2Q1 563 aa4.52□□□□□ -1.69
SCAF11-213ENST00000550629 A0A1B0GUS0 222 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 CXorf65A6NEN9 183 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 UPK2O00526 184 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 ACTL6BO94805 426 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 IFNA21P01568 189 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 IGHG2P01859 326 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 IGF1P05019 195 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 HLA-GP17693 338 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 G6PCP35575 357 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 COMPP49747 757 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 AKR1C2P52895 323 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 CRIP2P52943 208 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 TATDN3Q17R31 274 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 PDLIM3Q53GG5 364 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 NMSQ5H8A3 153 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 THOC7Q6I9Y2 204 aaKnown RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 ZNF429Q86V71 674 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 LURAP1LQ8IV03 231 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 VKORC1L1Q8N0U8 176 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 C12orf45Q8N5I9 185 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 SLC35G3Q8N808 338 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 OR4F5Q8NH21 305 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 OR5B3Q8NH48 314 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 RNASE11Q8TAA1 199 aaKnown RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 LHFPL5Q8TAF8 219 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 CASTOR1Q8WTX7 329 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 TMEM68Q96MH6 324 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 SPIN2AQ99865 258 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 SPIN2BQ9BPZ2 258 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 GON7Q9BXV9 100 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 COMMD5Q9GZQ3 224 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 FBXL15Q9H469 300 aa4.51□□□□□ -1.69
SCAF11-213ENST00000550629 ZNF430Q9H8G1 570 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 FOXA2Q9Y261 457 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-213ENST00000550629 ATRQ13535 2644 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 IGHV7-81A0A0B4J1V7 117 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 A0A0B4J293 547 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 C15orf61A6NNL5 157 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 FAM90A26D6RGX4 464 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 INS-IGF2F8WCM5 200 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 CNIH1O95406 144 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 TNFRSF6BO95407 300 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms