RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 SPSB3Q6PJ21 355 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 DUX4L9Q6RFH8 374 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-219ENST00000539952 SSX9Q7RTT3 188 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 MKXQ8IYA7 352 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM252Q8N6L7 170 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 OR4X2Q8NGF9 303 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 OR56B2PQ8NGI1 322 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 OR2AE1Q8NHA4 323 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 RNASEH2CQ8TDP1 164 aaKnown RBP4.76□□□□□ -1.65
CPSF7-219ENST00000539952 HPSE2Q8WWQ2 592 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 TOMM40LQ969M1 308 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 SPSB4Q96A44 273 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 LYZL4Q96KX0 146 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 ATP5SQ99766 215 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 FAAP24Q9BTP7 215 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 C11orf1Q9H5F2 150 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 TBL2Q9Y4P3 447 aaKnown RBP4.76□□□□□ -1.65
CPSF7-219ENST00000539952 LSM4Q9Y4Z0 139 aaKnown RBP4.76□□□□□ -1.65
CPSF7-219ENST00000539952 LCE6AA0A183 80 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 LOC102723971A0A1B0GUV8 181 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 FAM24AA6NFZ4 105 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM210A6NLX4 147 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 FAM90A26D6RGX4 464 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 CYB5BO43169 146 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 PPYP01298 95 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 FGF7P21781 194 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 AADACP22760 399 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 GPX4P36969 197 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-219ENST00000539952 CEACAM6P40199 344 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 MYCNOSP40205 109 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 NPBWR2P48146 333 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 HBG1P69891 147 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 HBG2P69892 147 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 ICAM4Q14773 271 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 SSX2Q16385 188 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 Q3ZCU0 254 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 DMRTC1Q5HYR2 192 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 TCTEX1D4Q5JR98 221 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM200BQ69YZ2 307 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 SLC25A24Q6NUK1 477 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 C16orf82Q7Z2V1 217 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 SELENOHQ8IZQ5 122 aaKnown RBP4.75□□□□□ -1.65
CPSF7-219ENST00000539952 HIST3H2BBQ8N257 126 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 LILRB2Q8N423 598 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 C11orf42Q8N5U0 333 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 SLC35G3Q8N808 338 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 LINC00482Q8N8I6 264 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 ZNF383Q8NA42 475 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 OR52M1Q8NGK5 317 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 OR5C1Q8NGR4 320 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 LSM10Q969L4 123 aaKnown RBP4.75□□□□□ -1.65
CPSF7-219ENST00000539952 SLAMF9Q96A28 289 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 ACY3Q96HD9 319 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 REEP6Q96HR9 211 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 FAM210BQ96KR6 192 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 GAFA1Q96PS6 74 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2AAQ96QV6 131 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 AGMATQ9BSE5 352 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 C20orf24Q9BUV8 137 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 RTL8AQ9BWD3 113 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 ACTR3CQ9C0K3 210 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-219ENST00000539952 SRD5A3Q9H8P0 318 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 SDF2L1Q9HCN8 221 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 GPR173Q9NS66 373 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 PRR13Q9NZ81 148 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 VAX2Q9UIW0 290 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 ST3GAL6Q9Y274 331 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 TIMM9Q9Y5J7 89 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 MPC1Q9Y5U8 109 aa4.75□□□□□ -1.65
CPSF7-219ENST00000539952 TENM2Q9NT68 2774 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 IGKV1D-8A0A087WSZ0 117 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 TRBV6-6A0A0A6YYG2 114 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 C17orf98A8MV24 154 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 H0Y980 276 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM250H0YL14 139 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BKO60814 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 YIF1AO95070 293 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BJP06899 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 PSG2P11465 335 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 SELLP14151 372 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BOP23527 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 GNRHRP30968 328 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BBP33778 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 PPP1CCP36873 323 aaKnown RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 AKR1C3P42330 323 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 THBS3P49746 956 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 RBM11P57052 281 aaKnown RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BDP58876 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 TAS2R60P59551 318 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 FXYD4P59646 89 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BCP62807 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 RPL31P62899 125 aaKnown RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 JOSD1Q15040 202 aaPredicted RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST2H2BEQ16778 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 ACOT6Q3I5F7 207 aaPredicted RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 SP6Q3SY56 376 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 PHLDA2Q53GA4 152 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 PYY3Q5JQD4 70 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 COA6Q5JTJ3 125 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms