RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TSC22D3Q99576 134 aa12.53□□□□□ -0.4
CPSF1-207ENST00000531727 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
CPSF1-207ENST00000531727 ALMS1Q8TCU4 4167 aa12.52□□□□□ -0.4
CPSF1-207ENST00000531727 DBX1A6NMT0 343 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 K7EMT4 169 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 TNFAIP8O95379 198 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 APOA1P02647 267 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 S100GP29377 79 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 ADMP35318 185 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 TSPAN5P62079 268 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 LAMTOR1Q6IAA8 161 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 CMTM3Q96MX0 182 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 C20orf24Q9BUV8 137 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 COMMD3Q9UBI1 195 aa12.52□□□□□ -0.41
CPSF1-207ENST00000531727 SMIM31A0A1B0GVY4 71 aa12.51□□□□□ -0.41
CPSF1-207ENST00000531727 APOC4P55056 127 aa12.51□□□□□ -0.41
CPSF1-207ENST00000531727 Q56UQ5 140 aa12.51□□□□□ -0.41
CPSF1-207ENST00000531727 TBC1D26Q86UD7 250 aa12.51□□□□□ -0.41
CPSF1-207ENST00000531727 OR1P1Q8NH06 330 aa12.51□□□□□ -0.41
CPSF1-207ENST00000531727 UBQLN2Q9UHD9 624 aa12.51□□□□□ -0.41
CPSF1-207ENST00000531727 TP53TG1Q9Y2A0 90 aa12.51□□□□□ -0.41
CPSF1-207ENST00000531727 EPPK1P58107 5090 aaKnown RBP12.51□□□□□ -0.41
CPSF1-207ENST00000531727 IGHV3OR16-8A0A075B7F1 116 aa12.5□□□□□ -0.41
CPSF1-207ENST00000531727 RCVRNP35243 200 aa12.5□□□□□ -0.41
CPSF1-207ENST00000531727 UCP3P55916 312 aa12.5□□□□□ -0.41
CPSF1-207ENST00000531727 NCS1P62166 190 aa12.5□□□□□ -0.41
CPSF1-207ENST00000531727 WFDC3Q8IUB2 231 aa12.5□□□□□ -0.41
CPSF1-207ENST00000531727 SNX29P2Q8IUI4 249 aa12.5□□□□□ -0.41
CPSF1-207ENST00000531727 SEC22AQ96IW7 307 aa12.5□□□□□ -0.41
CPSF1-207ENST00000531727 OR4C46A6NHA9 309 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 C15orf62A8K5M9 175 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 ZNF207O43670 478 aaKnown RBP12.49□□□□□ -0.41
CPSF1-207ENST00000531727 IGKV1-39P01597 117 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 IGKV1D-39P04432 117 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 CTSGP08311 255 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 ODF3L2Q3SX64 289 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 Q6ZWC4 215 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 H2BFWTQ7Z2G1 175 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 OR4A16Q8NH70 328 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 ZNF414Q96IQ9 312 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 FUNDC2Q9BWH2 189 aa12.49□□□□□ -0.41
CPSF1-207ENST00000531727 I3L2K1 104 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 UBE2CO00762 179 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 NUPL2O15504 423 aaKnown RBP12.48□□□□□ -0.41
CPSF1-207ENST00000531727 HPGDSO60760 199 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 CTSDP07339 412 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-207ENST00000531727 ELK1P19419 428 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-207ENST00000531727 MFAP4P55083 255 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 VBP1P61758 197 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-207ENST00000531727 ZNF114Q8NC26 417 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 MRGPRFQ96AM1 343 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 MISP3Q96FF7 219 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 TXN2Q99757 166 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 SMPXQ9UHP9 88 aa12.48□□□□□ -0.41
CPSF1-207ENST00000531727 KIR2DL5BA0A0G2JN68 375 aa12.47□□□□□ -0.41
CPSF1-207ENST00000531727 KIR2DL5BA0A0G2JPC4 375 aa12.47□□□□□ -0.41
CPSF1-207ENST00000531727 SPRY2O43597 315 aa12.47□□□□□ -0.41
CPSF1-207ENST00000531727 BMI1P35226 326 aa12.47□□□□□ -0.41
CPSF1-207ENST00000531727 KIR2DL5AQ8N109 375 aa12.47□□□□□ -0.41
CPSF1-207ENST00000531727 KIR2DL5BQ8NHK3 375 aa12.47□□□□□ -0.41
CPSF1-207ENST00000531727 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.41
CPSF1-207ENST00000531727 IGHV7-4-1A0A0J9YVY3 117 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 A0A0J9YWU9 116 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 M0QYG6 137 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 CHEK1O14757 476 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 MT-CO2P00403 227 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 HSPE1P61604 102 aaKnown RBP12.46□□□□□ -0.41
CPSF1-207ENST00000531727 TNFRSF9Q07011 255 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 DEFB135Q30KP9 77 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 LYG2Q86SG7 212 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 STPG3Q8N7X2 389 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 GALNT14Q96FL9 552 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 OR10C1Q96KK4 312 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 RNF2Q99496 336 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.41
CPSF1-207ENST00000531727 YIF1AO95070 293 aa12.45□□□□□ -0.42
CPSF1-207ENST00000531727 RORCP51449 518 aa12.45□□□□□ -0.42
CPSF1-207ENST00000531727 RND3P61587 244 aa12.45□□□□□ -0.42
CPSF1-207ENST00000531727 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
CPSF1-207ENST00000531727 TMEM116Q8NCL8 245 aa12.45□□□□□ -0.42
CPSF1-207ENST00000531727 RNF183Q96D59 192 aa12.45□□□□□ -0.42
CPSF1-207ENST00000531727 ZNF486Q96H40 463 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-207ENST00000531727 NXF2Q9GZY0 626 aaKnown RBP12.45□□□□□ -0.42
CPSF1-207ENST00000531727 CXorf65A6NEN9 183 aa12.44□□□□□ -0.42
CPSF1-207ENST00000531727 GNG7O60262 68 aa12.44□□□□□ -0.42
CPSF1-207ENST00000531727 IGHV3-48P01763 117 aa12.44□□□□□ -0.42
CPSF1-207ENST00000531727 RPL35AP18077 110 aaKnown RBP12.44□□□□□ -0.42
CPSF1-207ENST00000531727 EWSR1Q01844 656 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPSF1-207ENST00000531727 PMS2P11Q13670 270 aa12.44□□□□□ -0.42
CPSF1-207ENST00000531727 LHFPL1Q86WI0 220 aa12.44□□□□□ -0.42
CPSF1-207ENST00000531727 MAP6D1Q9H9H5 199 aa12.44□□□□□ -0.42
CPSF1-207ENST00000531727 BIRC6Q9NR09 4857 aa12.44□□□□□ -0.42
CPSF1-207ENST00000531727 IGHV3-49A0A0A0MS15 119 aa12.43□□□□□ -0.42
CPSF1-207ENST00000531727 NUPR2A6NF83 97 aa12.43□□□□□ -0.42
CPSF1-207ENST00000531727 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms