RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 HARBI1Q96MB7 349 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 E7EQL1 145 aa14.27□□□□□ -0.12
USH1C-205ENST00000527020 PPP5D1E7EU14 171 aa14.27□□□□□ -0.12
USH1C-205ENST00000527020 CD99P14209 185 aa14.27□□□□□ -0.12
USH1C-205ENST00000527020 MLANAQ16655 118 aa14.27□□□□□ -0.12
USH1C-205ENST00000527020 TMEM177Q53S58 311 aa14.27□□□□□ -0.12
USH1C-205ENST00000527020 MIR17HGQ75NE6 70 aa14.27□□□□□ -0.12
USH1C-205ENST00000527020 H1FXQ92522 213 aaKnown RBP14.27□□□□□ -0.12
USH1C-205ENST00000527020 LRFN3Q9BTN0 628 aa14.27□□□□□ -0.12
USH1C-205ENST00000527020 PTPRZ1P23471 2315 aaPredicted RBP14.27□□□□□ -0.12
USH1C-205ENST00000527020 E7EUB6 86 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 APOA2P02652 100 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 TYMSP04818 313 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 LOXP28300 417 aaPredicted RBP14.27□□□□□ -0.13
USH1C-205ENST00000527020 DLX6P56179 175 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 GAMTQ14353 236 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 SSX8Q7RTT4 187 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 OR1L8Q8NGR8 309 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 ZNF596Q8TC21 504 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 NDUFA4L2Q9NRX3 87 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 FKBP11Q9NYL4 201 aa14.27□□□□□ -0.13
USH1C-205ENST00000527020 CEP295Q9C0D2 2601 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 IGHV2-70P01814 119 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 CHRNB4P30926 498 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 FOXC1Q12948 553 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 OR4P4Q8NGL7 312 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 NABP2Q9BQ15 211 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 DVL1O14640 695 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 NDUFB3O43676 98 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 FAM3BP58499 235 aaPredicted RBP14.26□□□□□ -0.13
USH1C-205ENST00000527020 FAM78BQ5VT40 261 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 ST6GALNAC6Q969X2 333 aa14.26□□□□□ -0.13
USH1C-205ENST00000527020 ACTL6BO94805 426 aa14.25□□□□□ -0.13
USH1C-205ENST00000527020 GATA2P23769 480 aaPredicted RBP14.25□□□□□ -0.13
USH1C-205ENST00000527020 ATP5IP56385 69 aaPredicted RBP14.25□□□□□ -0.13
USH1C-205ENST00000527020 LRRC10Q5BKY1 277 aa14.25□□□□□ -0.13
USH1C-205ENST00000527020 LINC00311Q8N616 119 aa14.25□□□□□ -0.13
USH1C-205ENST00000527020 CGB1A6NKQ9 187 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 K7ENP7 123 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 FABP4P15090 132 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 RPL8P62917 257 aaKnown RBP14.24□□□□□ -0.13
USH1C-205ENST00000527020 ACTL10Q5JWF8 245 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 C8orf31Q8N9H6 132 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 OR9G1Q8NH87 305 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 C11orf52Q96A22 123 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 FLYWCH2Q96CP2 140 aaKnown RBP14.24□□□□□ -0.13
USH1C-205ENST00000527020 ZNF503Q96F45 646 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 FUT9Q9Y231 359 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 NAV3Q8IVL0 2385 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 TLN1Q9Y490 2541 aaKnown RBP14.24□□□□□ -0.13
USH1C-205ENST00000527020 IGLV2-23P01705 113 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 IL3RAP26951 378 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 OR10J1P30954 320 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 CD69Q07108 199 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 FAM71F2Q6NXP2 309 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 OR10X1Q8NGY0 326 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 OCC1Q8TAD7 63 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 SFRP2Q96HF1 295 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 HIST1H2BLQ99880 126 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 KAAG1Q9UBP8 84 aa14.24□□□□□ -0.13
USH1C-205ENST00000527020 PRSS8Q16651 343 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 TMEM155Q4W5P6 130 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 KCNIP4Q6PIL6 250 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 TMEM183AQ8IXX5 376 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 TMEM167AQ8TBQ9 72 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 SCNM1Q9BWG6 230 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 COMMD5Q9GZQ3 224 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 PTPRQQ9UMZ3 2332 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 INS-IGF2F8WCM5 200 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 LCN2P80188 198 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 COA6Q5JTJ3 125 aaKnown RBP14.23□□□□□ -0.13
USH1C-205ENST00000527020 PDPNQ86YL7 162 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 C11orf42Q8N5U0 333 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 OR4C13Q8NGP0 309 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 TMEM186Q96B77 213 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 SLC35E1Q96K37 410 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 IMMP2LQ96T52 175 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 DYNLRB1Q9NP97 96 aa14.23□□□□□ -0.13
USH1C-205ENST00000527020 PLXNB1O43157 2135 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 A0A087X0M5 115 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 A0A1B0GX30 115 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 VSTM5A8MXK1 200 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 AREGP15514 252 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 USF1P22415 310 aaPredicted RBP14.22□□□□□ -0.13
USH1C-205ENST00000527020 ZNF137PP52743 207 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 OR1P1Q8NH06 330 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 COL25A1Q9BXS0 654 aaPredicted RBP14.22□□□□□ -0.13
USH1C-205ENST00000527020 K7EN84 100 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 MT-CO2P00403 227 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 OR5G3P0C626 314 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 HNF1AP20823 631 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 RPL15P61313 204 aaKnown RBP14.22□□□□□ -0.13
USH1C-205ENST00000527020 WT1-ASQ06250 92 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 FOXL1Q12952 345 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 PSG5Q15238 335 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 C10orf55Q5SWW7 151 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 TEX38Q6PEX7 206 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 NGBQ9NPG2 151 aa14.22□□□□□ -0.13
USH1C-205ENST00000527020 DLL1O00548 723 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms