RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 BMPR1BO00238 502 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 YPEL1O60688 119 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 TSPOP30536 169 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 ZNF718Q3SXZ3 478 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 TMEM164Q5U3C3 297 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR2T6Q8NHC8 308 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 TSKUQ8WUA8 353 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 KLRC4-KLRK1H3BQV0 150 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 J3QR06 171 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 UBE2G1P62253 170 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 COX19Q49B96 90 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 Q6ZR03 302 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 TMEM136Q6ZRR5 245 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 CLEC5AQ9NY25 188 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 KMT2EQ8IZD2 1858 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 C9JCJ5 164 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 ZNF137PP52743 207 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 HSPE1P61604 102 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 PMCHL1Q16048 86 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 GABRA6Q16445 453 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 TNXAQ16473 311 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
TRAPPC9-208ENST00000520857 TRGV5A0A0B4J1U4 118 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 APOA2P02652 100 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 P0C879 139 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 S100A7P31151 101 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 KLF3P57682 345 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR10J3Q5JRS4 329 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 SFXN3Q9BWM7 321 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR51B2Q9Y5P1 312 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 YLPM1P49750 1951 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 MLANAQ16655 118 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 COX7A2P2O60397 106 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 CSN3P07498 182 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 CD46P15529 392 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR4A47Q6IF82 309 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 WDR82Q6UXN9 313 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 RND1Q92730 232 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 OSTCQ9NRP0 149 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 WDFY3Q8IZQ1 3526 aa10.59□□□□□ -0.71
TRAPPC9-208ENST00000520857 NCKAP5O14513 1909 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 TOX4O94842 621 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 TNFSF4P23510 183 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 SLAQ13239 276 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 FBLN7Q53RD9 439 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 RBMXL3Q8N7X1 1067 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 KLF13Q9Y2Y9 288 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 SELENOKQ9Y6D0 94 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 K7ESF4 209 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 COMPP49747 757 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 UBE2V1Q13404 147 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 Q8N7P7 452 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 OR9G1Q8NH87 305 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 SAP30LQ9HAJ7 183 aa10.58□□□□□ -0.72
TRAPPC9-208ENST00000520857 M0QZ24 198 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 MORN2Q502X0 79 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 FAM201AQ5SY85 155 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 EP300Q09472 2414 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 SPRY3O43610 288 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 NUDT3O95989 172 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 CEACAM8P31997 349 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 WDR31Q8NA23 367 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 DAZAP1Q96EP5 407 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 AMMECR1Q9Y4X0 333 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 SH2D7A6NKC9 451 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 AHRRA9YTQ3 701 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 AP1S3Q96PC3 154 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 CDX2Q99626 313 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 COMMD5Q9GZQ3 224 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 COX11Q9Y6N1 276 aa10.57□□□□□ -0.72
TRAPPC9-208ENST00000520857 TRAV9-2A0A087WT02 112 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 SS18L1O75177 396 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 NDUFB8O95169 186 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 AREGP15514 252 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 C18orf32Q8TCD1 76 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 FAM168AQ92567 244 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 OR2V2Q96R30 315 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 CHODLQ9H9P2 273 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 PILRBQ9UKJ0 227 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 IQCF6A8MYZ5 107 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 GGTLC3B5MD39 225 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 LINC00869P0C866 280 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 C8orf88P0DMB2 117 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 PYYP10082 97 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 ESDP10768 282 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 TCTAP57738 103 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 NIT1Q86X76 327 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 PMCHL2Q9BQD1 86 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 MCRIP2Q9BUT9 160 aaKnown RBP10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 TP73-AS1Q9UF72 201 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 KIAA1549Q9HCM3 1950 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 PCNX1Q96RV3 2341 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 OR4C46A6NHA9 309 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 SLC25A5P05141 298 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms