RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HIST1H1BP16401 226 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 HSPE1P61604 102 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 SPINK9Q5DT21 86 aa13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 LINC00299Q6ZSB3 139 aa13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 RRNAD1Q96FB5 475 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 AURKAIP1Q9NWT8 199 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 PTTG2Q9NZH5 202 aa13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 F11RQ9Y624 299 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-216ENST00000506537 NAP1L6A6NFF2 107 aa13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 ZP3P21754 424 aa13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 MECP2P51608 486 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 RBMS2Q15434 407 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 C9orf66Q5T8R8 295 aa13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 FAM219AQ8IW50 185 aa13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 SLC35G3Q8N808 338 aa13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 RNASE11Q8TAA1 199 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 IL22RA2Q969J5 263 aa13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 KCNIP3Q9Y2W7 256 aa13.98□□□□□ -0.17
PDLIM7-216ENST00000506537 PPP5D1E7EU14 171 aa13.97□□□□□ -0.17
PDLIM7-216ENST00000506537 PLA2G10O15496 165 aa13.97□□□□□ -0.17
PDLIM7-216ENST00000506537 KLF5Q13887 457 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-216ENST00000506537 AARDQ4LEZ3 155 aa13.97□□□□□ -0.17
PDLIM7-216ENST00000506537 OR2C3Q8N628 320 aa13.97□□□□□ -0.17
PDLIM7-216ENST00000506537 GPR146Q96CH1 333 aa13.97□□□□□ -0.17
PDLIM7-216ENST00000506537 BATF3Q9NR55 127 aa13.97□□□□□ -0.17
PDLIM7-216ENST00000506537 NDUFB6O95139 128 aa13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 PDLIM3Q53GG5 364 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 TMEM128Q5BJH2 165 aa13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 ACSM6Q6P461 480 aa13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 EEF1AKMT3Q96AZ1 226 aa13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 C7orf50Q9BRJ6 194 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 PLEKHA3Q9HB20 300 aa13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 CACNG5Q9UF02 275 aa13.96□□□□□ -0.17
PDLIM7-216ENST00000506537 HLA-AP01891 365 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 SYNJ2BPP57105 145 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 PPP1R1AQ13522 171 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 ANKRD55Q3KP44 614 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 NMSQ5H8A3 153 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 SLC25A24Q6NUK1 477 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 CLEC19AQ6UXS0 136 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 LYZL2Q7Z4W2 148 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 CENPSQ8N2Z9 138 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 ZNF502Q8TBZ5 544 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 CCDC32Q9BV29 185 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 FLVCR2Q9UPI3 526 aa13.95□□□□□ -0.18
PDLIM7-216ENST00000506537 TGP01266 2768 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 IGHV3-21A0A0B4J1V1 117 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 A0A0B4J2A0 478 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 INS-IGF2F8WCM5 200 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 K7EIM0 57 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 SAP30O75446 220 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 IFNA17P01571 189 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 ANXA3P12429 323 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 VAMP1P23763 118 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 RPEL1Q2QD12 228 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 OR1P1Q8NH06 330 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 CXorf58Q96LI9 332 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 SHPKQ9UHJ6 478 aa13.94□□□□□ -0.18
PDLIM7-216ENST00000506537 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 CENPXA8MT69 81 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 SFT2D2O95562 160 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 ARL3P36405 182 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 SRPXP78539 464 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 FAM209BQ5JX69 171 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 IL34Q6ZMJ4 242 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 LGI3Q8N145 548 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 VN1R17PQ8TDU5 208 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 S100ZQ8WXG8 99 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 PDCD10Q9BUL8 212 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 THYN1Q9P016 225 aa13.93□□□□□ -0.18
PDLIM7-216ENST00000506537 WI2-2373I1.2A0A1W2PRP0 233 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 CYB5BO43169 146 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 LYRM1O43325 122 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 GPR183P32249 361 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 HOXA1P49639 335 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 INSL3P51460 131 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 SPCS3P61009 180 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 REC114Q7Z4M0 266 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 HAPLN4Q86UW8 402 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 LRTM2Q8N967 370 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 OR9G4Q8NGQ1 327 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 OR1L6Q8NGR2 347 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 OR52E5Q8NH55 327 aa13.92□□□□□ -0.18
PDLIM7-216ENST00000506537 F8W735 103 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 K7EIL1 84 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 GGCTO75223 188 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 NXPH3O95157 252 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 OR2C1O95371 312 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 CLEC3BP05452 202 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 SULT1A3P0DMM9 295 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 SULT1A4P0DMN0 295 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 UBE2MP61081 183 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 ERHP84090 104 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 C11orf87Q6NUJ2 197 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 SCARB1Q8WTV0 552 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 ZC4H2Q9NQZ6 224 aa13.91□□□□□ -0.18
PDLIM7-216ENST00000506537 I3L2K1 104 aa13.9□□□□□ -0.18
PDLIM7-216ENST00000506537 RNASE2P10153 161 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms