RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MIEN1Q9BRT3 115 aa2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 TMEM147Q9BVK8 224 aa2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 XAGE1AQ9HD64 81 aa2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 TXNL4BQ9NX01 149 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 OPTCQ9UBM4 332 aa2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 MCTS1Q9ULC4 181 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 TMEM56-RWDD3S4R434 201 aa2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 CEP152O94986 1710 aa2.16□□□□□ -2.06
TRAPPC13-208ENST00000505553 THADAQ6YHU6 1953 aa2.15□□□□□ -2.06
TRAPPC13-208ENST00000505553 ABCC5O15440 1437 aa2.15□□□□□ -2.06
TRAPPC13-208ENST00000505553 CASKIN1Q8WXD9 1431 aa2.15□□□□□ -2.06
TRAPPC13-208ENST00000505553 MYOM1P52179 1685 aa2.15□□□□□ -2.06
TRAPPC13-208ENST00000505553 ADGRL2O95490 1459 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 SHANK3Q9BYB0 1731 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 RTL1A6NKG5 1358 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 USP32Q8NFA0 1604 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 EIF2AK4Q9P2K8 1649 aaKnown RBP2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 TRBV20OR9-2A0A075B6H5 130 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 A0A0J9YY10 115 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 A0A1B0GX78 115 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 C19orf71A6NCJ1 209 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 OR5K4A6NMS3 321 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 PIRO00625 290 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 CDS2O95674 445 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 HRES1P13985 223 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 RWDD2BP57060 319 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 FXYD7P58549 80 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 AP1S1P61966 158 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 RPL30P62888 115 aaKnown RBP2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 RUNX1Q01196 453 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 AKR1C1Q04828 323 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 DEFB134Q4QY38 66 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 PYDC2Q56P42 97 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 SSX8Q7RTT4 187 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 WDR61Q9GZS3 305 aaKnown RBP2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 C14orf105Q9NVL8 296 aa2.15□□□□□ -2.07
TRAPPC13-208ENST00000505553 CEP350Q5VT06 3117 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 NUP188Q5SRE5 1749 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 TNS1Q9HBL0 1735 aaKnown RBP2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 MARF1Q9Y4F3 1742 aaKnown RBP2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 TMEM131LA2VDJ0 1609 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 PTPN23Q9H3S7 1636 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 ROCK1Q13464 1354 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 ABCC12Q96J65 1359 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 NEXMIFQ5QGS0 1516 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 RREB1Q92766 1687 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 TMEM235A6NFC5 223 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 C17orf98A8MV24 154 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 SOD1P00441 154 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 IGLV3-19P01714 112 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 SERPINE1P05121 402 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 CD5P06127 495 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 CPMP14384 443 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 S100A7P31151 101 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 LYG2Q86SG7 212 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 CLDND2Q8NHS1 167 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 GNPDA2Q8TDQ7 276 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 CCDC90BQ9GZT6 254 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 GID8Q9NWU2 228 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 PAQR5Q9NXK6 330 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 EEA1Q15075 1411 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 ARID1AO14497 2285 aa2.14□□□□□ -2.07
TRAPPC13-208ENST00000505553 PXDNQ92626 1479 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 DUOX2Q9NRD8 1548 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 PLCH1Q4KWH8 1693 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 OTOFQ9HC10 1997 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 A0A1W2PQ67 120 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 H3BPC8 53 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 I3L521 148 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 TXNDC9O14530 226 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 RBP1P09455 135 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 GZMBP10144 247 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 CD24P25063 80 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 CSN1S1P47710 185 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 RPS20P60866 119 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 SNCBQ16143 134 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 FAM229BQ4G0N7 80 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 TNS3Q68CZ2 1445 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 ZNF561Q8N587 486 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 PACRGLQ8N7B6 248 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 NEK7Q8TDX7 302 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 SMCR5Q8TEV8 140 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 FAM172AQ8WUF8 416 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 NUP205Q92621 2012 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 LRRIQ1Q96JM4 1722 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 ERBINQ96RT1 1412 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 NIPSNAP1Q9BPW8 284 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 TM2D3Q9BRN9 247 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 CENPHQ9H3R5 247 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 C16orf95Q9H693 158 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 EFCAB1Q9HAE3 211 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 MRPL16Q9NX20 251 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 FBXL12Q9NXK8 326 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 LAMC1P11047 1609 aa2.13□□□□□ -2.07
TRAPPC13-208ENST00000505553 ARHGEF10O15013 1369 aa2.12□□□□□ -2.07
TRAPPC13-208ENST00000505553 KIF26AQ9ULI4 1882 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC13-208ENST00000505553 NALCNQ8IZF0 1738 aa2.12□□□□□ -2.07
TRAPPC13-208ENST00000505553 XRN1Q8IZH2 1706 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-208ENST00000505553 NWD2Q9ULI1 1742 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms