RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 DEFA5Q01523 94 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 FGL1Q08830 312 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 TCTE3Q8IZS6 198 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 Q8N2B8 174 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 CIB3Q96Q77 187 aaPredicted RBP15.22■□□□□ 0.03
USP39-218ENST00000493829 RPL23AP62750 156 aaKnown RBP15.21■□□□□ 0.03
USP39-218ENST00000493829 ZNF329Q86UD4 541 aa15.21■□□□□ 0.03
USP39-218ENST00000493829 P2RX4Q99571 388 aa15.21■□□□□ 0.03
USP39-218ENST00000493829 C11orf1Q9H5F2 150 aa15.21■□□□□ 0.03
USP39-218ENST00000493829 ZNF355PQ9NSJ1 428 aa15.21■□□□□ 0.03
USP39-218ENST00000493829 SERTAD4Q9NUC0 356 aa15.21■□□□□ 0.03
USP39-218ENST00000493829 FAM24AA6NFZ4 105 aa15.2■□□□□ 0.02
USP39-218ENST00000493829 RNASE2P10153 161 aaKnown RBP15.2■□□□□ 0.02
USP39-218ENST00000493829 DEFA4P12838 97 aa15.2■□□□□ 0.02
USP39-218ENST00000493829 NPY1RP25929 384 aa15.2■□□□□ 0.02
USP39-218ENST00000493829 C10orf99Q6UWK7 81 aa15.2■□□□□ 0.02
USP39-218ENST00000493829 HSD17B13Q7Z5P4 300 aaPredicted RBP15.2■□□□□ 0.02
USP39-218ENST00000493829 SMIM8Q96KF7 97 aa15.2■□□□□ 0.02
USP39-218ENST00000493829 SRSF8Q9BRL6 282 aaKnown RBP15.2■□□□□ 0.02
USP39-218ENST00000493829 E5RGE8 158 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 SOX15O60248 233 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 FBXO24O75426 580 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 TSPAN9O75954 239 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 CTRB1P17538 263 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 CRIP2P52943 208 aaPredicted RBP15.19■□□□□ 0.02
USP39-218ENST00000493829 AKIRIN2Q53H80 203 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 C19orf54Q5BKX5 351 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 CTRB2Q6GPI1 263 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 FAM110DQ8TAY7 271 aaPredicted RBP15.19■□□□□ 0.02
USP39-218ENST00000493829 TMEM170AQ8WVE7 144 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 WNT10AQ9GZT5 417 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 STRAPQ9Y3F4 350 aaKnown RBP15.19■□□□□ 0.02
USP39-218ENST00000493829 C15orf62A8K5M9 175 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 NPIPB5A8MRT5 1133 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 HTR2BP41595 481 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 MFAP2P55001 183 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 TTC9CQ8N5M4 171 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.19■□□□□ 0.02
USP39-218ENST00000493829 OR11H4Q8NGC9 324 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 MISP3Q96FF7 219 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 MS4A10Q96PG2 267 aa15.19■□□□□ 0.02
USP39-218ENST00000493829 F11RQ9Y624 299 aaKnown RBP15.19■□□□□ 0.02
USP39-218ENST00000493829 IGSF23A1L1A6 192 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 INS-IGF2F8WCM5 200 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 TSC22D2O75157 780 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 OR8U8P0C7N1 319 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 METTL15P1P0C7V9 234 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 LCNL1Q6ZST4 164 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 LYRM2Q9NU23 88 aaPredicted RBP15.18■□□□□ 0.02
USP39-218ENST00000493829 DMRT1Q9Y5R6 373 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 U3KQ87 197 aa15.18■□□□□ 0.02
USP39-218ENST00000493829 ARPC5O15511 151 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 CST7O76096 145 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 TAS2R30P59541 319 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 BSXQ3C1V8 233 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 ZFP69Q49AA0 526 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 OR8G2PQ6IF36 304 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 SLC25A24Q6NUK1 477 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 PRIMA1Q86XR5 153 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 LINC01006Q8NI28 216 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 PINX1Q96BK5 328 aaKnown RBP15.17■□□□□ 0.02
USP39-218ENST00000493829 ZC4H2Q9NQZ6 224 aa15.17■□□□□ 0.02
USP39-218ENST00000493829 IGHV3-21A0A0B4J1V1 117 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 PSMB11A5LHX3 300 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 IFNA4P05014 189 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 CRYGCP07315 174 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 SLC25A4P12235 298 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 LYL1P12980 280 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 MDKP21741 143 aaPredicted RBP15.16■□□□□ 0.02
USP39-218ENST00000493829 P2RY1P47900 373 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 AP2S1P53680 142 aaPredicted RBP15.16■□□□□ 0.02
USP39-218ENST00000493829 RPP30P78346 268 aaKnown RBP15.16■□□□□ 0.02
USP39-218ENST00000493829 CFHR3Q02985 330 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 ZNF546Q86UE3 836 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 ZNF114Q8NC26 417 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 TMEM68Q96MH6 324 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 JMJD1CQ15652 2540 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 NDUFA7O95182 113 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 C1QBP02746 253 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 PF4V1P10720 104 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 PPIFP30405 207 aaKnown RBP15.16■□□□□ 0.02
USP39-218ENST00000493829 SUB1P53999 127 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP39-218ENST00000493829 C2orf83Q53S99 150 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 CENPVQ7Z7K6 275 aaPredicted RBP15.16■□□□□ 0.02
USP39-218ENST00000493829 TMEM252Q8N6L7 170 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 TMEM217Q8N7C4 229 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 OR1P1Q8NH06 330 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 OR4F5Q8NH21 305 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 C16orf95Q9H693 158 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 S4R3C0 116 aa15.16■□□□□ 0.02
USP39-218ENST00000493829 BOLA2-SMG1P6H3BVE0 249 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 HAX1O00165 279 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 OR2J3O76001 311 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 IGHV3-48P01763 117 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 EWSR1Q01844 656 aaKnown RBP eCLIP15.15■□□□□ 0.02
USP39-218ENST00000493829 TMEM14EPQ6UXP3 125 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 ETV3LQ6ZN32 361 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 KLHDC1Q8N7A1 406 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 ZNF580Q9UK33 172 aa15.15■□□□□ 0.02
USP39-218ENST00000493829 LY86O95711 162 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms