RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 BSCL2Q96G97 398 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-232ENST00000489053 CCDC140Q96MF4 163 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 SCGB3A2Q96PL1 93 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 ABHD1Q96SE0 405 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 PRRT1Q99946 306 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 C20orf24Q9BUV8 137 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 NDUFA4L2Q9NRX3 87 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 MCUBQ9NWR8 336 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 C21orf62Q9NYP8 219 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 F11RQ9Y624 299 aaKnown RBP6.95□□□□□ -1.3
HDAC6-232ENST00000489053 TNCP24821 2201 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 IGHV3-21A0A0B4J1V1 117 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 IGHV3-35A0A0C4DH35 117 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 FABP12A6NFH5 140 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 LGALS9O00182 355 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 NUPL2O15504 423 aaKnown RBP6.94□□□□□ -1.3
HDAC6-232ENST00000489053 TGOLN2O43493 480 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 YIF1AO95070 293 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 S100A5P33763 92 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 FAUP35544 74 aaKnown RBP6.94□□□□□ -1.3
HDAC6-232ENST00000489053 SUB1P53999 127 aaKnown RBP eCLIP6.94□□□□□ -1.3
HDAC6-232ENST00000489053 RND3P61587 244 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 HSPE1P61604 102 aaKnown RBP6.94□□□□□ -1.3
HDAC6-232ENST00000489053 WT1-ASQ06250 92 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 ZNF585BQ52M93 769 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 LAMTOR1Q6IAA8 161 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 SPSB3Q6PJ21 355 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 CADM3Q8N126 398 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 OR13C8Q8NGS7 320 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 OR1P1Q8NH06 330 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 ZNF502Q8TBZ5 544 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 MARCH1Q8TCQ1 289 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 PINX1Q96BK5 328 aaKnown RBP6.94□□□□□ -1.3
HDAC6-232ENST00000489053 SEC22AQ96IW7 307 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 RCHY1Q96PM5 261 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 TMEM14BQ9NUH8 114 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 SCP2D1Q9UJQ7 156 aa6.94□□□□□ -1.3
HDAC6-232ENST00000489053 CGB1A6NKQ9 187 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 H3BMQ9 156 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 CD74P04233 296 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 CTSDP07339 412 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-232ENST00000489053 CBLN1P23435 193 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 BMI1P35226 326 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 INPP1P49441 399 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 AP3S2P59780 193 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 PRCDQ00LT1 54 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 RELQ04864 619 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-232ENST00000489053 SURF2Q15527 256 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-232ENST00000489053 PYDC2Q56P42 97 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 IL34Q6ZMJ4 242 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 SBSPONQ8IVN8 264 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 UXS1Q8NBZ7 420 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 OR4D10Q8NGI6 311 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 OR52B4Q8NGK2 314 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 DYNC2LI1Q8TCX1 351 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 CACNG8Q8WXS5 425 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 ISOC1Q96CN7 298 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 NEURL2Q9BR09 285 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 MIXL1Q9H2W2 232 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 KCNIP3Q9Y2W7 256 aa6.93□□□□□ -1.3
HDAC6-232ENST00000489053 IZUMO1RA6ND01 250 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 A8MWP6 167 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 CTDSPLO15194 276 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 GNG7O60262 68 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 SCAF4O95104 1147 aaKnown RBP6.92□□□□□ -1.3
HDAC6-232ENST00000489053 ANXA3P12429 323 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 NPBWR1P48145 328 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 MFAP4P55083 255 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 ELLP55199 621 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-232ENST00000489053 DHODHQ02127 395 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 DEFB114Q30KQ6 69 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 SP6Q3SY56 376 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 SPINK9Q5DT21 86 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 FAAP20Q6NZ36 180 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 BTNL8Q6UX41 500 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 LHFPL1Q86WI0 220 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 OR4C16Q8NGL9 310 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 TP53RKQ96S44 253 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 ATP6V0BQ99437 205 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 SPATA25Q9BR10 227 aa6.92□□□□□ -1.3
HDAC6-232ENST00000489053 DAZ1Q9NQZ3 744 aaKnown RBP6.92□□□□□ -1.3
HDAC6-232ENST00000489053 MRPL27Q9P0M9 148 aaKnown RBP6.92□□□□□ -1.3
HDAC6-232ENST00000489053 TRAV25A0A0B4J276 109 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 PIGBOS1A0A0B4J2F0 54 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 CEBPZOSA8MTT3 80 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 OR11H12B2RN74 326 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 NDUFA4O00483 81 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 OR5AC1P0C628 307 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 KLK9Q2XQG4 91 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 FAM219AQ8IW50 185 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 OR2C3Q8N628 320 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 DUSP18Q8NEJ0 188 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 OR51S1Q8NGJ8 323 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 SCARB1Q8WTV0 552 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 TMEM190Q8WZ59 177 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 WDR89Q96FK6 387 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-232ENST00000489053 GINS3Q9BRX5 216 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 TMEM222Q9H0R3 208 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms