RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 THYN1Q9P016 225 aa8.38□□□□□ -1.07
ATG4B-219ENST00000479941 FLVCR2Q9UPI3 526 aa8.38□□□□□ -1.07
ATG4B-219ENST00000479941 MEGF8Q7Z7M0 2845 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 FAM240BA0A1B0GVZ2 78 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 C9orf170A2RU37 121 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 INS-IGF2F8WCM5 200 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 LINC01619G3V211 115 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 ST8SIA3O43173 380 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 DUS4LO95620 317 aaKnown RBP8.37□□□□□ -1.07
ATG4B-219ENST00000479941 HLA-AP01891 365 aaKnown RBP8.37□□□□□ -1.07
ATG4B-219ENST00000479941 TCRBP04435 133 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 HSPB1P04792 205 aaKnown RBP8.37□□□□□ -1.07
ATG4B-219ENST00000479941 OR4E1P0C645 316 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 SULT1A3P0DMM9 295 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 SULT1A4P0DMN0 295 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 ERHP84090 104 aaKnown RBP8.37□□□□□ -1.07
ATG4B-219ENST00000479941 C15orf32Q32M92 178 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 NMSQ5H8A3 153 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 FAM209BQ5JX69 171 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 ZNF343Q6P1L6 599 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 C19orf35Q6ZS72 473 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 RCC1LQ96I51 464 aaKnown RBP8.37□□□□□ -1.07
ATG4B-219ENST00000479941 ALX4Q9H161 411 aaPredicted RBP8.37□□□□□ -1.07
ATG4B-219ENST00000479941 C20orf85Q9H1P6 137 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 PLEKHA3Q9HB20 300 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 CACNG5Q9UF02 275 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 FBXL7Q9UJT9 491 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 TBC1D24Q9ULP9 559 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 F11RQ9Y624 299 aaKnown RBP8.37□□□□□ -1.07
ATG4B-219ENST00000479941 DNAH3Q8TD57 4116 aa8.37□□□□□ -1.07
ATG4B-219ENST00000479941 IGHV4OR15-8A0A075B7B6 117 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 A0A087WW49 117 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 ANXA7P20073 488 aaKnown RBP8.36□□□□□ -1.07
ATG4B-219ENST00000479941 SPCS3P61009 180 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 DEFA5Q01523 94 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 IFITM3Q01628 133 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 DHRS2Q13268 280 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 ANKRD55Q3KP44 614 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 C4orf46Q504U0 113 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 PDLIM3Q53GG5 364 aaPredicted RBP8.36□□□□□ -1.07
ATG4B-219ENST00000479941 OR2C3Q8N628 320 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 ZNF114Q8NC26 417 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 COQ8AQ8NI60 647 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 CXorf58Q96LI9 332 aa8.36□□□□□ -1.07
ATG4B-219ENST00000479941 MCRIP2Q9BUT9 160 aaKnown RBP8.36□□□□□ -1.07
ATG4B-219ENST00000479941 PEF1Q9UBV8 284 aaKnown RBP8.36□□□□□ -1.07
ATG4B-219ENST00000479941 A0A1B0GU03 582 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 NDUFB8O95169 186 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 ZP3P21754 424 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 SNCAP37840 140 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 DEFA1P59665 94 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 DEFA3P59666 94 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 EXOSC2Q13868 293 aaKnown RBP8.35□□□□□ -1.07
ATG4B-219ENST00000479941 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 SLC25A24Q6NUK1 477 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 LYG2Q86SG7 212 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 ENKURQ8TC29 256 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 EEF1AKMT3Q96AZ1 226 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 GPR61Q9BZJ8 451 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 ENY2Q9NPA8 101 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 NUDT15Q9NV35 164 aa8.35□□□□□ -1.07
ATG4B-219ENST00000479941 TRAV6A0A075B6T7 132 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.34□□□□□ -1.07
ATG4B-219ENST00000479941 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 ANKRD34BA5PLL1 514 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 SLC25A6P12236 298 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 IGLL1P15814 213 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
ATG4B-219ENST00000479941 SUB1P53999 127 aaKnown RBP eCLIP8.34□□□□□ -1.07
ATG4B-219ENST00000479941 SPINK9Q5DT21 86 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 VN1R17PQ8TDU5 208 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 DMRT1Q9Y5R6 373 aa8.34□□□□□ -1.07
ATG4B-219ENST00000479941 CEBPZOSA8MTT3 80 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 OVOL1O14753 267 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 HOXB5P09067 269 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
ATG4B-219ENST00000479941 SLURP1P55000 103 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 MFAP2P55001 183 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 TNFRSF9Q07011 255 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 DUSP18Q8NEJ0 188 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 OR1S1Q8NH92 325 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 DLX4Q92988 240 aaPredicted RBP8.33□□□□□ -1.08
ATG4B-219ENST00000479941 ATP6V0BQ99437 205 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 HIPK2Q9H2X6 1198 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 HEYLQ9NQ87 328 aaPredicted RBP8.33□□□□□ -1.08
ATG4B-219ENST00000479941 HSPB7Q9UBY9 170 aa8.33□□□□□ -1.08
ATG4B-219ENST00000479941 MFSD2BA6NFX1 497 aa8.32□□□□□ -1.08
ATG4B-219ENST00000479941 FAM90A26D6RGX4 464 aa8.32□□□□□ -1.08
ATG4B-219ENST00000479941 G3V4G9 280 aa8.32□□□□□ -1.08
ATG4B-219ENST00000479941 PITX3O75364 302 aa8.32□□□□□ -1.08
ATG4B-219ENST00000479941 IFNA21P01568 189 aa8.32□□□□□ -1.08
ATG4B-219ENST00000479941 TRBV12-3P01733 135 aa8.32□□□□□ -1.08
ATG4B-219ENST00000479941 HTR2BP41595 481 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms