RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 HIVEP3Q5T1R4 2406 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 USF1P22415 310 aaPredicted RBP10.53□□□□□ -0.72
SEC13-216ENST00000479868 NPPCP23582 126 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 RPS10P46783 165 aaKnown RBP10.53□□□□□ -0.72
SEC13-216ENST00000479868 LY6DQ14210 128 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 ADIRFQ15847 76 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 MLANAQ16655 118 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 C2orf83Q53S99 150 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 C10orf55Q5SWW7 151 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 SPNS3Q6ZMD2 512 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 IGHV3-72A0A0B4J1Y9 119 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 CGB1A6NKQ9 187 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 FNDC10F2Z333 226 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 RPL29P47914 159 aaKnown RBP10.52□□□□□ -0.73
SEC13-216ENST00000479868 ATP5G3P48201 142 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 SPATA31B1PQ5VZV4 182 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 LINC00518Q8N0U6 118 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 OR51G1Q8NGK1 321 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 OR1L8Q8NGR8 309 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 TMEM167AQ8TBQ9 72 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 NEIL1Q96FI4 390 aaPredicted RBP10.52□□□□□ -0.73
SEC13-216ENST00000479868 KCNIP2Q9NS61 270 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 IGHV2-26A0A0B4J1V2 119 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 PPOXP50336 477 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
SEC13-216ENST00000479868 PRR20EP86478 221 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 PRR20CP86479 221 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 PRR20DP86480 221 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 PRR20BP86481 221 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 PRR20AP86496 221 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 RAB31Q13636 194 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 GAMTQ14353 236 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 PCGF1Q9BSM1 259 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 ZNF430Q9H8G1 570 aaPredicted RBP10.52□□□□□ -0.73
SEC13-216ENST00000479868 TPSG1Q9NRR2 321 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 TMEM242Q9NWH2 141 aa10.52□□□□□ -0.73
SEC13-216ENST00000479868 C5orf52A6NGY3 159 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 CLDN34H7C241 214 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 SLC25A17O43808 307 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 LINC00869P0C866 280 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 KIAA0141Q14154 515 aaPredicted RBP10.51□□□□□ -0.73
SEC13-216ENST00000479868 CST9LP1Q5W188 147 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 TMEM144Q7Z5S9 345 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 VSTM2AQ8TAG5 236 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 ARHGAP32A7KAX9 2087 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
SEC13-216ENST00000479868 CXorf1O96002 111 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 RND2P52198 227 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 WT1-ASQ06250 92 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 OR4A5Q8NH83 315 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 SLC45A2Q9UMX9 530 aa10.51□□□□□ -0.73
SEC13-216ENST00000479868 PPIAL4CA0A0B4J2A2 164 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 ENSAO43768 121 aaKnown RBP10.5□□□□□ -0.73
SEC13-216ENST00000479868 FSTL3O95633 263 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 PPIAL4GP0DN37 164 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 GATA2P23769 480 aaPredicted RBP10.5□□□□□ -0.73
SEC13-216ENST00000479868 ATP5IP56385 69 aaPredicted RBP10.5□□□□□ -0.73
SEC13-216ENST00000479868 GNB1P62873 340 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 MRGPRG-AS1Q2M3A8 158 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 HLA-DRB5Q30154 266 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 FOXH1O75593 365 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 IL3RAP26951 378 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 MC5RP33032 325 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 SSTP61278 116 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 RHOBP62745 196 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 ERHP84090 104 aaKnown RBP10.5□□□□□ -0.73
SEC13-216ENST00000479868 CD69Q07108 199 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 DERL1Q9BUN8 251 aa10.5□□□□□ -0.73
SEC13-216ENST00000479868 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
SEC13-216ENST00000479868 PDE6DO43924 150 aa10.49□□□□□ -0.73
SEC13-216ENST00000479868 ACTL6BO94805 426 aa10.49□□□□□ -0.73
SEC13-216ENST00000479868 SOD3P08294 240 aa10.49□□□□□ -0.73
SEC13-216ENST00000479868 SFTPCP11686 197 aa10.49□□□□□ -0.73
SEC13-216ENST00000479868 C16orf82Q7Z2V1 217 aa10.49□□□□□ -0.73
SEC13-216ENST00000479868 A0A1W2PN81 502 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 DLL1O00548 723 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 IGHV2-5P01817 119 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 CNTFRP26992 372 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 OR10J1P30954 320 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 CHRNA7P36544 502 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 VMA21Q3ZAQ7 101 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 FAM78BQ5VT40 261 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 C11orf71Q6IPW1 123 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 MIR17HGQ75NE6 70 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 OR2T6Q8NHC8 308 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 TNFRSF14Q92956 283 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 CLEC7AQ9BXN2 247 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 RAB1BQ9H0U4 201 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 CBLN4Q9NTU7 201 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 YTHDF2Q9Y5A9 579 aaKnown RBP10.48□□□□□ -0.73
SEC13-216ENST00000479868 BUB1B-PAK6H3BSN5 160 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 UBE2CO00762 179 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 NDUFB4O95168 129 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms