RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 NCKAP5O14513 1909 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 IGHV3-15A0A0B4J1V0 119 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 SIVA1O15304 175 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 SYNGR1O43759 233 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 PATE4P0C8F1 98 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 FASLGP48023 281 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 FOXE3Q13461 319 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 ESPL1Q14674 2120 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 SPEM1Q8N4L4 309 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 FADS6Q8N9I5 356 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 RLN3Q8WXF3 142 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 TNRC6BQ9UPQ9 1833 aaKnown RBP11.4□□□□□ -0.58
HDAC1-206ENST00000476391 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 COL9A1P20849 921 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 CAMPP49913 170 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 BRWD1-AS2P59051 145 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF497Q6ZNH5 498 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 COLCA1Q6ZS62 124 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 FAM214BQ7L5A3 538 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 NFAM1Q8NET5 270 aaPredicted RBP11.4□□□□□ -0.58
HDAC1-206ENST00000476391 OR2Z1Q8NG97 314 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 OR9G4Q8NGQ1 327 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 UCN2Q96RP3 112 aa11.4□□□□□ -0.58
HDAC1-206ENST00000476391 NAA38Q9BRA0 125 aaKnown RBP11.4□□□□□ -0.58
HDAC1-206ENST00000476391 GEMIN7Q9H840 131 aaKnown RBP11.4□□□□□ -0.58
HDAC1-206ENST00000476391 MBNL3Q9NUK0 354 aaKnown RBP11.4□□□□□ -0.58
HDAC1-206ENST00000476391 LILRA5A6NI73 299 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 C17orf98A8MV24 154 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 B4GALT1P15291 398 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 TEPPQ6URK8 271 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 LINC00470Q9BZP3 86 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 LOXL2Q9Y4K0 774 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 GGTLC3B5MD39 225 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 CEACAM16Q2WEN9 425 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 OR4X2Q8NGF9 303 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 SNRNP40Q96DI7 357 aaKnown RBP11.39□□□□□ -0.59
HDAC1-206ENST00000476391 C1orf159Q96HA4 380 aa11.39□□□□□ -0.59
HDAC1-206ENST00000476391 LAMA2P24043 3122 aaKnown RBP11.39□□□□□ -0.59
HDAC1-206ENST00000476391 SNAI2O43623 268 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 FAM87AP0C7U9 286 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 CA6P23280 308 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 MIR17HGQ75NE6 70 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 BOD1L2Q8IYS8 172 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 TEX45Q8NA69 505 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 PLEKHA3Q9HB20 300 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 SZT2Q5T011 3432 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 FER1L5A0AVI2 2057 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 SPTY2D1-AS1A0A0U1RR47 76 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 HBBP68871 147 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 PRR20EP86478 221 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 PRR20CP86479 221 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 PRR20DP86480 221 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 PRR20BP86481 221 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 PRR20AP86496 221 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-206ENST00000476391 GCM1Q9NP62 436 aa11.38□□□□□ -0.59
HDAC1-206ENST00000476391 A1L4Q6 167 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 AESQ08117 197 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 Q6P435 159 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 MRPL21Q7Z2W9 205 aaKnown RBP11.37□□□□□ -0.59
HDAC1-206ENST00000476391 ABCA7Q8IZY2 2146 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 CDX2Q99626 313 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-206ENST00000476391 FOXB1Q99853 325 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 DUSP23Q9BVJ7 150 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 HEYLQ9NQ87 328 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-206ENST00000476391 HILPDAQ9Y5L2 63 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 UNC13CQ8NB66 2214 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 SPAARA0A1B0GVQ0 90 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 A0A1B0GX78 115 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 TSPAN13O95857 204 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-206ENST00000476391 VEGFBP49765 207 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 ADAMTSL5Q6ZMM2 481 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 YAF2Q8IY57 180 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 UBALD1Q8TB05 177 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 ADTRPQ96IZ2 230 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 ZNF488Q96MN9 340 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 VGLL1Q99990 258 aa11.37□□□□□ -0.59
HDAC1-206ENST00000476391 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-206ENST00000476391 F8W1H4 67 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 GFRA3O60609 400 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 MYF5P13349 255 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 IGFBP2P18065 325 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 FOXA3P55318 350 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-206ENST00000476391 GUSBP1Q15486 140 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 LTC4SQ16873 150 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 ZNF808Q8N4W9 903 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-206ENST00000476391 OR1L3Q8NH93 324 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 FGFBP3Q8TAT2 258 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 MCRIP2Q9BUT9 160 aaKnown RBP11.36□□□□□ -0.59
HDAC1-206ENST00000476391 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
HDAC1-206ENST00000476391 BOKQ9UMX3 212 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms