RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 G6PC2Q9NQR9 355 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 SPINK2P20155 84 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 RBM11P57052 281 aaKnown RBP9.82□□□□□ -0.84
U2AF1-209ENST00000475639 C16orf47Q6ZP98 133 aaPredicted RBP9.82□□□□□ -0.84
U2AF1-209ENST00000475639 NPIPB7O75200 414 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 NPPCP23582 126 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 SNRPD3P62318 126 aaKnown RBP9.82□□□□□ -0.84
U2AF1-209ENST00000475639 LCN2P80188 198 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 PIGYQ3MUY2 71 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 ATOH7Q8N100 152 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 TBL2Q9Y4P3 447 aaKnown RBP9.82□□□□□ -0.84
U2AF1-209ENST00000475639 CEACAM1P13688 526 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 HSPE1P61604 102 aaKnown RBP9.81□□□□□ -0.84
U2AF1-209ENST00000475639 EGR4Q05215 589 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 TDRG1Q3Y452 100 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 MIC13Q5XKP0 118 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 GCSAMQ8N6F7 178 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 GATAD1Q8WUU5 269 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 SFXN3Q9BWM7 321 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 HILPDAQ9Y5L2 63 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 ZNF407Q9C0G0 2248 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 A0A1W2PP11 408 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 A0A1W2PQD3 144 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM240Q5SV17 173 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 ST6GALNAC3Q8NDV1 305 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 COL6A6A6NMZ7 2263 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 SZT2Q5T011 3432 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 FAM90A26D6RGX4 464 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM50AO95807 157 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 CA1P00915 261 aaPredicted RBP9.81□□□□□ -0.84
U2AF1-209ENST00000475639 BGLAPP02818 100 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 CTGFP29279 349 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 NXPH1P58417 271 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 CCL8P80075 99 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 CDCP2Q5VXM1 449 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 PYGO2Q9BRQ0 406 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 PKDREJQ9NTG1 2253 aa9.81□□□□□ -0.84
U2AF1-209ENST00000475639 PFN1P07737 140 aaKnown RBP9.8□□□□□ -0.84
U2AF1-209ENST00000475639 UMODP07911 640 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 SRSF6Q13247 344 aaKnown RBP9.8□□□□□ -0.84
U2AF1-209ENST00000475639 DEFB124Q8NES8 71 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM170AQ8WVE7 144 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 SDF2L1Q9HCN8 221 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 TRPM6Q9BX84 2022 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 C9JCJ5 164 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 H0Y980 276 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 CCL25O15444 150 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 CRYBB3P26998 211 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 FXYD3Q14802 87 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 NXT2Q9NPJ8 142 aaKnown RBP9.8□□□□□ -0.84
U2AF1-209ENST00000475639 FOXS1O43638 330 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 CKS1BP61024 79 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 C5orf30Q96GV9 206 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 COX14Q96I36 57 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 FBLN5Q9UBX5 448 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 IGHV3-72A0A0B4J1Y9 119 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 OR5A1Q8NGJ0 315 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 ZNF581Q9P0T4 197 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 IL36RNQ9UBH0 155 aa9.8□□□□□ -0.84
U2AF1-209ENST00000475639 TRAV21A0A0B4J279 112 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM249Q2WGJ8 235 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 SPINK14Q6IE38 97 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 ATG4DQ86TL0 474 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-209ENST00000475639 VKORC1L1Q8N0U8 176 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 OR2K2Q8NGT1 345 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 ZNF524Q96C55 264 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 C1orf147Q96MC9 270 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-209ENST00000475639 MED12Q93074 2177 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 ACACAQ13085 2346 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 RRHO14718 337 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 FOXA3P55318 350 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-209ENST00000475639 ZNF488Q96MN9 340 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 ARHGEF17Q96PE2 2063 aaPredicted RBP9.79□□□□□ -0.84
U2AF1-209ENST00000475639 UCP3P55916 312 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 PRSS41Q7RTY9 318 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 CTHRC1Q96CG8 243 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 C18orf15Q96N68 181 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 SLC25A15Q9Y619 301 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 C20orf144Q9BQM9 153 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM222Q9H0R3 208 aa9.79□□□□□ -0.84
U2AF1-209ENST00000475639 RIF1Q5UIP0 2472 aaKnown RBP9.78□□□□□ -0.84
U2AF1-209ENST00000475639 IGKV1D-8A0A087WSZ0 117 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 CD33P20138 364 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 TRIP6Q15654 476 aaKnown RBP9.78□□□□□ -0.84
U2AF1-209ENST00000475639 GOLT1AQ6ZVE7 132 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 TPRX1Q8N7U7 411 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 SCGB3A1Q96QR1 104 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 MEGF9Q9H1U4 602 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 ABCA7Q8IZY2 2146 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 TNFSF14O43557 240 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 DUX5Q96PT3 197 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 CCL13Q99616 98 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 IGLV1-36A0A0B4J1U3 117 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 TRAV24A0A0B4J272 114 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 GRIFINA4D1Z8 144 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 Q6ZS52 159 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 FGFRL1Q8N441 504 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms