RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 TMEM136Q6ZRR5 245 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 MMD2Q8IY49 270 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 OR2D2Q9H210 308 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 HES4Q9HCC6 221 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 LIN7CQ9NUP9 197 aaKnown RBP10.74□□□□□ -0.69
CCNL1-216ENST00000475298 NAT8BQ9UHF3 227 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 CACNA1GO43497 2377 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 PRR33A8MZF0 331 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 IGKV3-15P01624 115 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 RPL30P62888 115 aaKnown RBP10.73□□□□□ -0.69
CCNL1-216ENST00000475298 ZNF816Q0VGE8 651 aaPredicted RBP10.73□□□□□ -0.69
CCNL1-216ENST00000475298 GCSAMLQ5JQS6 135 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 OR8I2Q8N0Y5 310 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 FGFRL1Q8N441 504 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 Q8N7P7 452 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 BORCS7Q96B45 105 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 COQ2Q96H96 371 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 TMEM204Q9BSN7 226 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 TMEM147Q9BVK8 224 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 CADP27708 2225 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 IGHV3-43A0A0B4J1X8 118 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 BMPR1BO00238 502 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 TIMM8AO60220 97 aaPredicted RBP10.73□□□□□ -0.69
CCNL1-216ENST00000475298 IGHV3-43DP0DP04 118 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 NTF3P20783 257 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 SRIP30626 198 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 EBLN2Q6P2I7 272 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 PRSS57Q6UWY2 283 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 TCF24Q7RTU0 167 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 PIP4P1Q86T03 277 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 WFDC12Q8WWY7 111 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 V9GYV3 84 aa10.73□□□□□ -0.69
CCNL1-216ENST00000475298 TRAV8-6A0A0B4J262 113 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 TRAV38-1A0A0B4J264 116 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 MUC21A0A0G2JKD1 596 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 MUC21A0A140T8X8 626 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 TMEM30CPA0ZSE6 113 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 CLDN1O95832 211 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 HBZP02008 142 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 SSTR5P35346 364 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 G6PCP35575 357 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 LGALS7P47929 136 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 TBR1Q16650 682 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 RPEL1Q2QD12 228 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 TMEM249Q2WGJ8 235 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 MUC21Q5SSG8 566 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 WDR82Q6UXN9 313 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 OR4S2Q8NH73 311 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 RFESDQ8TAC1 157 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 ST6GALNAC6Q969X2 333 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 ZC2HC1AQ96GY0 325 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 DCTN5Q9BTE1 182 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 KCNIP1Q9NZI2 227 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 WASHC3Q9Y3C0 194 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 G3V4G9 280 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 SPINK4O60575 86 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 NUDT3O95989 172 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 DEFB109BQ30KR1 87 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 Q56UQ5 140 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 ACP7Q6ZNF0 438 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 ZNF439Q8NDP4 499 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 GALMQ96C23 342 aa10.72□□□□□ -0.69
CCNL1-216ENST00000475298 DEFB108AA8MXU0 73 aa10.71□□□□□ -0.69
CCNL1-216ENST00000475298 GOSR1O95249 250 aa10.71□□□□□ -0.69
CCNL1-216ENST00000475298 IGLC1P0CG04 106 aa10.71□□□□□ -0.69
CCNL1-216ENST00000475298 RPS16P62249 146 aaKnown RBP10.71□□□□□ -0.69
CCNL1-216ENST00000475298 LTC4SQ16873 150 aa10.71□□□□□ -0.69
CCNL1-216ENST00000475298 ZNF645Q8N7E2 425 aa10.71□□□□□ -0.69
CCNL1-216ENST00000475298 OR10P1Q8NGE3 313 aa10.71□□□□□ -0.69
CCNL1-216ENST00000475298 PLPPR2Q96GM1 343 aa10.71□□□□□ -0.69
CCNL1-216ENST00000475298 RP1L1Q8IWN7 2480 aaPredicted RBP10.71□□□□□ -0.7
CCNL1-216ENST00000475298 J3QR06 171 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 MT-ND6P03923 174 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 GATA2P23769 480 aaPredicted RBP10.7□□□□□ -0.7
CCNL1-216ENST00000475298 BRWD1-AS2P59051 145 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 CX3CL1P78423 397 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 HTD2P86397 168 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 PAX2Q02962 417 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 FER1L6-AS1Q8NA97 138 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 OR8B3Q8NGG8 313 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 OR13A1Q8NGR1 328 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 OR8B2Q96RD0 313 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 TAAR6Q96RI8 345 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 CXXC4Q9H2H0 198 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 SH3BGRL2Q9UJC5 107 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 SMG1Q96Q15 3661 aaKnown RBP10.7□□□□□ -0.7
CCNL1-216ENST00000475298 AKAP13Q12802 2813 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 TRAV17A0A0B4J275 112 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 PIGBOS1A0A0B4J2F0 54 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 IGHV1-18A0A0C4DH31 117 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.7□□□□□ -0.7
CCNL1-216ENST00000475298 FAM181BA6NEQ2 426 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 C17orf98A8MV24 154 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 RBPJQ06330 500 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 S100A7AQ86SG5 101 aa10.7□□□□□ -0.7
CCNL1-216ENST00000475298 SELENOVP59797 346 aa10.69□□□□□ -0.7
CCNL1-216ENST00000475298 NHLH1Q02575 133 aa10.69□□□□□ -0.7
CCNL1-216ENST00000475298 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
CCNL1-216ENST00000475298 MSMPQ1L6U9 139 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms