RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 S100A1P23297 94 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 CD24P25063 80 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 CAMLGP49069 296 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 GNB1P62873 340 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 SERF2P84101 59 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 HNF4GQ14541 408 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 TMEM249Q2WGJ8 235 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 PXDC1Q5TGL8 231 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 PVRIGQ6DKI7 326 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 HIST2H2BCQ6DN03 193 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 DPPA3Q6W0C5 159 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 EIF4E3Q8N5X7 224 aaKnown RBP7.48□□□□□ -1.21
VPS52-216ENST00000471309 RNASEH2CQ8TDP1 164 aaKnown RBP7.48□□□□□ -1.21
VPS52-216ENST00000471309 SRSF12Q8WXF0 261 aaKnown RBP7.48□□□□□ -1.21
VPS52-216ENST00000471309 RSG1Q9BU20 258 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 NPCDR1Q9BY65 106 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 C1RLQ9NZP8 487 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 UTP20O75691 2785 aaKnown RBP7.48□□□□□ -1.21
VPS52-216ENST00000471309 USP9YO00507 2555 aaPredicted RBP7.47□□□□□ -1.21
VPS52-216ENST00000471309 FBN2P35556 2912 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 IGHV3OR16-10A0A075B7F0 116 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 A0A0U1RQK1 487 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 MFSD2BA6NFX1 497 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 C17orf112F2Z3M2 114 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 PRH1P02810 166 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 OR13C7P0DN81 318 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 IGHV4-38-2P0DP08 117 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 BPIFB3P59826 476 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 ARSJQ5FYB0 599 aaPredicted RBP7.47□□□□□ -1.21
VPS52-216ENST00000471309 KLF17Q5JT82 389 aaPredicted RBP7.47□□□□□ -1.21
VPS52-216ENST00000471309 AKR1C8PQ5T2L2 129 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 BTNL8Q6UX41 500 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 TREML4Q6UXN2 200 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 BRD3OSQ6XYD6 125 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 LYPD6BQ8NI32 183 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 P2RX4Q99571 388 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 MEGF9Q9H1U4 602 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 KCNIP2Q9NS61 270 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 NOTCH2Q04721 2471 aa7.47□□□□□ -1.21
VPS52-216ENST00000471309 AKAP6Q13023 2319 aa7.46□□□□□ -1.21
VPS52-216ENST00000471309 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.21
VPS52-216ENST00000471309 CR1P17927 2039 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 SMCO3A2RU48 225 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 CORTO00230 105 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 FCN1O00602 326 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 TSPAN9O75954 239 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 TGFAP01135 160 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 HLA-DRB1P01911 266 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 FBP1P09467 338 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 AREGP15514 252 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 GPX4P36969 197 aaPredicted RBP7.46□□□□□ -1.22
VPS52-216ENST00000471309 AKR1C1Q04828 323 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 CD69Q07108 199 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 ZNF616Q08AN1 781 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 AANATQ16613 207 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 FAM120AOSQ5T036 256 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 ZNF562Q6V9R5 426 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 IL34Q6ZMJ4 242 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 ZNF709Q8N972 641 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 Q8N9W7 124 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 OR1P1Q8NH06 330 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 FAM213BQ8TBF2 198 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 CACNG8Q8WXS5 425 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 ARPC1AQ92747 370 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 CITED4Q96RK1 184 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 NPVFQ9HCQ7 196 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 FBXO7Q9Y3I1 522 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 LSM4Q9Y4Z0 139 aaKnown RBP7.46□□□□□ -1.22
VPS52-216ENST00000471309 RFNGQ9Y644 331 aa7.46□□□□□ -1.22
VPS52-216ENST00000471309 RAB19A4D1S5 217 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 NCBP2LA6PVI3 153 aaKnown RBP7.45□□□□□ -1.22
VPS52-216ENST00000471309 CNIH1O95406 144 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 AVPP01185 164 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 FSHBP01225 129 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 MBP02144 154 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 REG1AP05451 166 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 OPRK1P41145 380 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 FHITP49789 147 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 RAB31Q13636 194 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 FXYD3Q14802 87 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 TMEM41BQ5BJD5 291 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 ACSM6Q6P461 480 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 TEPPQ6URK8 271 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 UQCC3Q6UW78 93 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 COMMD1Q8N668 190 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 MAPK1IP1LQ8NDC0 245 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 OR1L6Q8NGR2 347 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 ABHD5Q8WTS1 349 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 SSMEM1Q8WWF3 244 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 MARC2Q969Z3 335 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 MGST2Q99735 147 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 FOXC2Q99958 501 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 HRH4Q9H3N8 390 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 FAM96BQ9Y3D0 163 aa7.45□□□□□ -1.22
VPS52-216ENST00000471309 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
VPS52-216ENST00000471309 TEP1Q99973 2627 aaKnown RBP7.45□□□□□ -1.22
VPS52-216ENST00000471309 ANKRD17O75179 2603 aaKnown RBP7.44□□□□□ -1.22
VPS52-216ENST00000471309 BTBD17A6NE02 478 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms