RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ATP5IP56385 69 aaPredicted RBP14.49□□□□□ -0.09
SMC4-211ENST00000469858 DEFB113Q30KQ7 82 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 HIST2H2BCQ6DN03 193 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 TREML4Q6UXN2 200 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 ZNF709Q8N972 641 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 BEX4Q9NWD9 120 aaPredicted RBP14.49□□□□□ -0.09
SMC4-211ENST00000469858 B4DSR2 109 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 AKR1C1Q04828 323 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 RUSC1-AS1Q66K80 236 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 CENPVQ7Z7K6 275 aaPredicted RBP14.49□□□□□ -0.09
SMC4-211ENST00000469858 NPBQ8NG41 125 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 FAM210AQ96ND0 272 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 RPRMQ9NS64 109 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 IGLC7A0M8Q6 106 aa14.48□□□□□ -0.09
SMC4-211ENST00000469858 NDUFA3O95167 84 aa14.48□□□□□ -0.09
SMC4-211ENST00000469858 DPPA3Q6W0C5 159 aa14.48□□□□□ -0.09
SMC4-211ENST00000469858 LINC00052Q96N35 136 aa14.48□□□□□ -0.09
SMC4-211ENST00000469858 PSMG3-AS1Q96PY0 264 aa14.48□□□□□ -0.09
SMC4-211ENST00000469858 SVEP1Q4LDE5 3571 aa14.48□□□□□ -0.09
SMC4-211ENST00000469858 C17orf112F2Z3M2 114 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 H2AFB1P0C5Y9 115 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 SSBP2P81877 361 aaPredicted RBP14.47□□□□□ -0.09
SMC4-211ENST00000469858 SRSF3P84103 164 aaKnown RBP14.47□□□□□ -0.09
SMC4-211ENST00000469858 ACSM6Q6P461 480 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 MRPL41Q8IXM3 137 aaKnown RBP14.47□□□□□ -0.09
SMC4-211ENST00000469858 SRSF12Q8WXF0 261 aaKnown RBP14.47□□□□□ -0.09
SMC4-211ENST00000469858 NARS2Q96I59 477 aaKnown RBP14.47□□□□□ -0.09
SMC4-211ENST00000469858 TMEM231Q9H6L2 316 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 C7orf69Q9H7B7 122 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 NPVFQ9HCQ7 196 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 HIF1ANQ9NWT6 349 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 A0A096LNT2 108 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 IGHV1-69DA0A0B4J2H0 117 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 IGHV1-69P01742 117 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 AREGP15514 252 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 TMEM11P17152 192 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 TMEM41BQ5BJD5 291 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 FFAR4Q5NUL3 377 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 UQCC3Q6UW78 93 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 BPIFCQ8NFQ6 507 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 P2RX4Q99571 388 aa14.47□□□□□ -0.09
SMC4-211ENST00000469858 NCBP2LA6PVI3 153 aaKnown RBP14.46□□□□□ -0.09
SMC4-211ENST00000469858 MPDU1O75352 247 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 CNIH1O95406 144 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 SUB1P53999 127 aaKnown RBP eCLIP14.46□□□□□ -0.09
SMC4-211ENST00000469858 RAB2AP61019 212 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 EBI3Q14213 229 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 C5orf64Q2M2E5 130 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 FAM120AOSQ5T036 256 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 Q8N6K4 173 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 SFT2D1Q8WV19 159 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 MGST2Q99735 147 aa14.46□□□□□ -0.09
SMC4-211ENST00000469858 ABCA12Q86UK0 2595 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 TEX22C9J3V5 150 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 ZP3P21754 424 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 BRS3P32247 399 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 Q5PR19 223 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 BRD3OSQ6XYD6 125 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 MAPK1IP1LQ8NDC0 245 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 FAM96BQ9Y3D0 163 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 FAM106CPP0CH98 169 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 CD69Q07108 199 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 MLANAQ16655 118 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 TEPPQ6URK8 271 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 LRRC75A-AS1Q8N1F1 130 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 C1orf159Q96HA4 380 aa14.45□□□□□ -0.1
SMC4-211ENST00000469858 RCC1LQ96I51 464 aaKnown RBP14.45□□□□□ -0.1
SMC4-211ENST00000469858 LSM4Q9Y4Z0 139 aaKnown RBP14.45□□□□□ -0.1
SMC4-211ENST00000469858 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.45□□□□□ -0.15e-7■■■■■ 48.1
SMC4-211ENST00000469858 TRAV20A0A0B4J274 112 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 KRBOX1C9JBD0 128 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 RNF223E7ERA6 249 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 FNDC10F2Z333 226 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 IGHV4-38-2P0DP08 117 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 ZNF726P1Q15940 193 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 SPSB3Q6PJ21 355 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 C19orf35Q6ZS72 473 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 SSMEM1Q8WWF3 244 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 GGTLC1Q9BX51 225 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 TREM1Q9NP99 234 aa14.44□□□□□ -0.1
SMC4-211ENST00000469858 MAP1AP78559 2803 aaPredicted RBP14.44□□□□□ -0.1
SMC4-211ENST00000469858 OPRK1P41145 380 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 SSX7Q7RTT5 188 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 COMMD1Q8N668 190 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 LINC01356Q8N9X3 169 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 LFNGQ8NES3 379 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 RNASEH2CQ8TDP1 164 aaKnown RBP14.43□□□□□ -0.1
SMC4-211ENST00000469858 ABHD5Q8WTS1 349 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 MBP02144 154 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 CCL20P78556 96 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 GAMTQ14353 236 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 FXYD3Q14802 87 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 SLC16A13Q7RTY0 426 aa14.43□□□□□ -0.1
SMC4-211ENST00000469858 RPP25LQ8N5L8 163 aaKnown RBP14.43□□□□□ -0.1
SMC4-211ENST00000469858 EIF3GO75821 320 aaKnown RBP eCLIP14.42□□□□□ -0.18e-13■■■■■ 59.2
SMC4-211ENST00000469858 MIC13Q5XKP0 118 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 LCN15Q6UWW0 184 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 ZNF114Q8NC26 417 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 OR10G4Q8NGN3 311 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 OR10G9Q8NGN4 311 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms