RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ST8SIA3O43173 380 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 RBMXL2O75526 392 aaKnown RBP14.79□□□□□ -0.04
USP11-205ENST00000467378 DEFA1P59665 94 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 DEFA3P59666 94 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 PRCDQ00LT1 54 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 C4orf46Q504U0 113 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 C8orf86Q6ZUL3 223 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 NRARPQ7Z6K4 114 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 B9D2Q9BPU9 175 aa14.79□□□□□ -0.04
USP11-205ENST00000467378 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.79□□□□□ -0.04
USP11-205ENST00000467378 NUDT19A8MXV4 375 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 I3L521 148 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 DUS4LO95620 317 aaKnown RBP14.78□□□□□ -0.04
USP11-205ENST00000467378 OR13C7P0DN81 318 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 RAB25P57735 213 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 OR52B4Q8NGK2 314 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 ENKURQ8TC29 256 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 C4orf3Q8WVX3 66 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 FANCD2OSQ96PS1 177 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 CACNG5Q9UF02 275 aa14.78□□□□□ -0.04
USP11-205ENST00000467378 RUNX1Q01196 453 aa14.77□□□□□ -0.05
USP11-205ENST00000467378 DEFA5Q01523 94 aa14.77□□□□□ -0.05
USP11-205ENST00000467378 ETV3LQ6ZN32 361 aa14.77□□□□□ -0.05
USP11-205ENST00000467378 WFDC9Q8NEX5 89 aa14.77□□□□□ -0.05
USP11-205ENST00000467378 OR52E5Q8NH55 327 aa14.77□□□□□ -0.05
USP11-205ENST00000467378 BIRC6Q9NR09 4857 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 A0A0G2JLM5 398 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 IFNA17P01571 189 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 SULT1A3P0DMM9 295 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 SULT1A4P0DMN0 295 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 KRTAP10-11P60412 298 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 SMCO1Q147U7 214 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 SPINK9Q5DT21 86 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 COQ8AQ8NI60 647 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 USMG5Q96IX5 58 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 OR5B12Q96R08 314 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 PDCD10Q9BUL8 212 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 TMED3Q9Y3Q3 217 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 DMRT1Q9Y5R6 373 aa14.76□□□□□ -0.05
USP11-205ENST00000467378 EPPK1P58107 5090 aaKnown RBP14.75□□□□□ -0.05
USP11-205ENST00000467378 IGLV11-55A0A075B6I3 123 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 A0A1B0GU03 582 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 FAM223BA6NKX1 122 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 INS-IGF2F8WCM5 200 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 DHFRP00374 187 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 IGHV3-11P01762 117 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 HOXB5P09067 269 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 LGALS1P09382 135 aaKnown RBP14.75□□□□□ -0.05
USP11-205ENST00000467378 SPCS3P61009 180 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 RHOGP84095 191 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 DEFB136Q30KP8 78 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 FAM223AQ8IWN6 122 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 OR2C3Q8N628 320 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 NECAP1Q8NC96 275 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 MITD1Q8WV92 249 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 RAX2Q96IS3 184 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 SEC22CQ9BRL7 303 aa14.75□□□□□ -0.05
USP11-205ENST00000467378 C13orf42A0A1B0GVH6 325 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 PITX3O75364 302 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 ADAP1O75689 374 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 OR2J3O76001 311 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 SLC25A6P12236 298 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 DEFA4P12838 97 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 HIST1H1BP16401 226 aaKnown RBP14.74□□□□□ -0.05
USP11-205ENST00000467378 MYCNOSP40205 109 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 MFAP2P55001 183 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 GGNBP1Q5YKI7 109 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 ZNF431Q8TF32 576 aaPredicted RBP14.74□□□□□ -0.05
USP11-205ENST00000467378 DUX3Q96PT4 197 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 P2RX4Q99571 388 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 PLEKHA3Q9HB20 300 aa14.74□□□□□ -0.05
USP11-205ENST00000467378 F11RQ9Y624 299 aaKnown RBP14.74□□□□□ -0.05
USP11-205ENST00000467378 C3orf84H3BNL1 204 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 CCL24O00175 119 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 NDUFB8O95169 186 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 IL5P05113 134 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 ERHP84090 104 aaKnown RBP14.73□□□□□ -0.05
USP11-205ENST00000467378 ATP5G2Q06055 141 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 ZNF343Q6P1L6 599 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 MRPL41Q8IXM3 137 aaKnown RBP14.73□□□□□ -0.05
USP11-205ENST00000467378 OR11H1Q8NG94 326 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 MARVELD1Q9BSK0 173 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 FBXL7Q9UJT9 491 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 U3KQK5 164 aa14.73□□□□□ -0.05
USP11-205ENST00000467378 PF4P02776 101 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 SPNP16150 400 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 FHL3Q13643 280 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 SLC25A24Q6NUK1 477 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 PLET1Q6UQ28 207 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 ZNF114Q8NC26 417 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 OR1N2Q8NGR9 330 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 PALMDQ9NP74 551 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 HSPB7Q9UBY9 170 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 CACFD1Q9UGQ2 172 aa14.72□□□□□ -0.05
USP11-205ENST00000467378 MPTX1A8MV57 137 aa14.71□□□□□ -0.05
USP11-205ENST00000467378 INMT-MINDY4F8WBC2 141 aa14.71□□□□□ -0.05
USP11-205ENST00000467378 NXPH3O95157 252 aa14.71□□□□□ -0.05
USP11-205ENST00000467378 HSPB1P04792 205 aaKnown RBP14.71□□□□□ -0.05
USP11-205ENST00000467378 HOXD3P31249 432 aaPredicted RBP14.71□□□□□ -0.05
USP11-205ENST00000467378 C15orf32Q32M92 178 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms