RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 OR11H7Q8NGC8 314 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 WFDC12Q8WWY7 111 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 MS4A10Q96PG2 267 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 HIPK2Q9H2X6 1198 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 LSM5Q9Y4Y9 91 aaKnown RBP7.96□□□□□ -1.14
UPF2-204ENST00000460569 INS-IGF2F8WCM5 200 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 MBPP02686 304 aaPredicted RBP7.95□□□□□ -1.14
UPF2-204ENST00000460569 CRYGCP07315 174 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 ELANEP08246 267 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 TPPP2P59282 170 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 CYCSP99999 105 aaKnown RBP7.95□□□□□ -1.14
UPF2-204ENST00000460569 DEFA5Q01523 94 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 ID3Q02535 119 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 FOXE3Q13461 319 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 RAB32Q13637 225 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 LRRC37A5PQ49AS3 106 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 KHDC1LQ5JSQ8 128 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 TMEM65Q6PI78 240 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 WIPF2Q8TF74 440 aaPredicted RBP7.95□□□□□ -1.14
UPF2-204ENST00000460569 CIB3Q96Q77 187 aaPredicted RBP7.95□□□□□ -1.14
UPF2-204ENST00000460569 P2RX4Q99571 388 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 NMES1Q9C002 83 aa7.95□□□□□ -1.14
UPF2-204ENST00000460569 RCL1Q9Y2P8 373 aaKnown RBP7.95□□□□□ -1.14
UPF2-204ENST00000460569 F11RQ9Y624 299 aaKnown RBP7.95□□□□□ -1.14
UPF2-204ENST00000460569 H3BP45 60 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 H3BUA1 57 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 K7EPK0 472 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 CYB5BO43169 146 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 OR2J3O76001 311 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 IFNA10P01566 189 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 TRGV3P03979 118 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 RPLP1P05386 114 aaKnown RBP7.94□□□□□ -1.14
UPF2-204ENST00000460569 RNASE2P10153 161 aaKnown RBP7.94□□□□□ -1.14
UPF2-204ENST00000460569 CD28P10747 220 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 HIST1H1BP16401 226 aaKnown RBP7.94□□□□□ -1.14
UPF2-204ENST00000460569 NPY1RP25929 384 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 PSMB8P28062 276 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 HTR2BP41595 481 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 SUB1P53999 127 aaKnown RBP eCLIP7.94□□□□□ -1.14
UPF2-204ENST00000460569 KRTAP10-3P60369 221 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 RHOGP84095 191 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 IL15RAQ13261 267 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 HIST2H2BDQ6DRA6 164 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 C12orf54Q6X4T0 127 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 ZNF114Q8NC26 417 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 SLC24A4Q8NFF2 622 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 OR1P1Q8NH06 330 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 WDR89Q96FK6 387 aaPredicted RBP7.94□□□□□ -1.14
UPF2-204ENST00000460569 ZNF436Q9C0F3 470 aaPredicted RBP7.94□□□□□ -1.14
UPF2-204ENST00000460569 KLK15Q9H2R5 256 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 SLA2Q9H6Q3 261 aa7.94□□□□□ -1.14
UPF2-204ENST00000460569 PAIP2BQ9ULR5 123 aaKnown RBP7.94□□□□□ -1.14
UPF2-204ENST00000460569 IGLV11-55A0A075B6I3 123 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 L7N2F9 121 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 LY86O95711 162 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 GIPP09681 153 aaPredicted RBP7.93□□□□□ -1.14
UPF2-204ENST00000460569 PVALBP20472 110 aaPredicted RBP7.93□□□□□ -1.14
UPF2-204ENST00000460569 RAB9AP51151 201 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 MFAP2P55001 183 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 VAMP2P63027 116 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 SRSF4Q08170 494 aaKnown RBP7.93□□□□□ -1.14
UPF2-204ENST00000460569 TCTEX1D4Q5JR98 221 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 SLC25A24Q6NUK1 477 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 RNF152Q8N8N0 203 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 OR1L6Q8NGR2 347 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 PPP1R1CQ8WVI7 109 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 MISP3Q96FF7 219 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 FANCD2OSQ96PS1 177 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 RAB40CQ96S21 281 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 CITED2Q99967 270 aaPredicted RBP7.93□□□□□ -1.14
UPF2-204ENST00000460569 ZFP57Q9NU63 452 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 PSENENQ9NZ42 101 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 FBXL7Q9UJT9 491 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 DMRT1Q9Y5R6 373 aa7.93□□□□□ -1.14
UPF2-204ENST00000460569 TRBV9A0A0B4J1U6 114 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 A0A1B0GVG6 124 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 A0A1W2PRX2 142 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 TCRBV4S1A1TA0A5B7 111 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 FAM223BA6NKX1 122 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 BRI3O95415 125 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 PET100P0DJ07 73 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 RAP2BP61225 183 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 RPL23AP62750 156 aaKnown RBP7.92□□□□□ -1.14
UPF2-204ENST00000460569 RPP30P78346 268 aaKnown RBP7.92□□□□□ -1.14
UPF2-204ENST00000460569 CD83Q01151 205 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 C15orf32Q32M92 178 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 BSXQ3C1V8 233 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 C2orf83Q53S99 150 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 SPANXN5Q5MJ07 72 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 NOXA1Q86UR1 476 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 FAM223AQ8IWN6 122 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 C3orf56Q8N813 242 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 NECAP1Q8NC96 275 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 ASB13Q8WXK3 278 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 PINX1Q96BK5 328 aaKnown RBP7.92□□□□□ -1.14
UPF2-204ENST00000460569 OR4C12Q96R67 309 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 MDFIQ99750 246 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 THYN1Q9P016 225 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 STRAPQ9Y3F4 350 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms