RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 SELENOHQ8IZQ5 122 aaKnown RBP7.78□□□□□ -1.16
RFX3-210ENST00000457373 CADM3Q8N126 398 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 LHFPL5Q8TAF8 219 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 DEDD2Q8WXF8 326 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 DCUN1D4Q92564 292 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 RRNAD1Q96FB5 475 aaKnown RBP7.78□□□□□ -1.16
RFX3-210ENST00000457373 USMG5Q96IX5 58 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 TMEM56Q96MV1 263 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 TMEM222Q9H0R3 208 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 RANGRFQ9HD47 186 aaPredicted RBP7.78□□□□□ -1.16
RFX3-210ENST00000457373 BATF3Q9NR55 127 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 NDUFA4L2Q9NRX3 87 aa7.78□□□□□ -1.16
RFX3-210ENST00000457373 TRBV9A0A0B4J1U6 114 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 A0A0G2JRQ6 117 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 NAP1L6A6NFF2 107 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 FAM223BA6NKX1 122 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 CENPXA8MT69 81 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 DUS4LO95620 317 aaKnown RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 CDS2O95674 445 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 IGHV3-23P01764 117 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 PRB2P02812 416 aaPredicted RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 FGF2P09038 288 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 HSPE1P61604 102 aaKnown RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 WT1-ASQ06250 92 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 EXOSC2Q13868 293 aaKnown RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 TMEM187Q14656 261 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 SPINK9Q5DT21 86 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 SLC25A24Q6NUK1 477 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 ZNF343Q6P1L6 599 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 FAM223AQ8IWN6 122 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 NECAP1Q8NC96 275 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 OR5B3Q8NH48 314 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 DLX4Q92988 240 aaPredicted RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 LSM10Q969L4 123 aaKnown RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 SLC25A21Q9BQT8 299 aaPredicted RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 SRSF8Q9BRL6 282 aaKnown RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 MCRIP2Q9BUT9 160 aaKnown RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 PEF1Q9UBV8 284 aaKnown RBP7.77□□□□□ -1.17
RFX3-210ENST00000457373 S4R3C0 116 aa7.77□□□□□ -1.17
RFX3-210ENST00000457373 IGLV11-55A0A075B6I3 123 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 A0A0B4J293 547 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 SEC14L6B5MCN3 397 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 OVOL1O14753 267 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 IFNA17P01571 189 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 TRBV12-3P01733 135 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 ANXA3P12429 323 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 HIST1H1BP16401 226 aaKnown RBP7.76□□□□□ -1.17
RFX3-210ENST00000457373 HOXD3P31249 432 aaPredicted RBP7.76□□□□□ -1.17
RFX3-210ENST00000457373 SUPT4H1P63272 117 aaKnown RBP7.76□□□□□ -1.17
RFX3-210ENST00000457373 RBMS2Q15434 407 aaKnown RBP7.76□□□□□ -1.17
RFX3-210ENST00000457373 C15orf32Q32M92 178 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 HSD17B13Q7Z5P4 300 aaPredicted RBP7.76□□□□□ -1.17
RFX3-210ENST00000457373 CENPSQ8N2Z9 138 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 S100ZQ8WXG8 99 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 RBPMSQ93062 196 aaKnown RBP7.76□□□□□ -1.17
RFX3-210ENST00000457373 GPR146Q96CH1 333 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 GALNT14Q96FL9 552 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 C7orf50Q9BRJ6 194 aaKnown RBP7.76□□□□□ -1.17
RFX3-210ENST00000457373 PDCD10Q9BUL8 212 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 TMEM14BQ9NUH8 114 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 PTTG2Q9NZH5 202 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 TRRAPQ9Y4A5 3859 aa7.76□□□□□ -1.17
RFX3-210ENST00000457373 CYB5BO43169 146 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 ST8SIA3O43173 380 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 P0C879 139 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 PRCDQ00LT1 54 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 RPEL1Q2QD12 228 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 TMEM128Q5BJH2 165 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 C9orf66Q5T8R8 295 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 CLEC19AQ6UXS0 136 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 Q6ZRM9 215 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 LINC00299Q6ZSB3 139 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 LGI3Q8N145 548 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 SLC35G3Q8N808 338 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 EEF1AKMT3Q96AZ1 226 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 GPR61Q9BZJ8 451 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 FLVCR2Q9UPI3 526 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 DMRT1Q9Y5R6 373 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 F11RQ9Y624 299 aaKnown RBP7.75□□□□□ -1.17
RFX3-210ENST00000457373 TMEM56-RWDD3S4R434 201 aa7.75□□□□□ -1.17
RFX3-210ENST00000457373 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.74□□□□□ -1.17
RFX3-210ENST00000457373 IGHV3-21A0A0B4J1V1 117 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 MFSD2BA6NFX1 497 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 PPP5D1E7EU14 171 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 PLA2G10O15496 165 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 LYRM1O43325 122 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 NDUFB6O95139 128 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 SFT2D2O95562 160 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 ZP3P21754 424 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 MFAP2P55001 183 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 ERHP84090 104 aaKnown RBP7.74□□□□□ -1.17
RFX3-210ENST00000457373 ZNF846Q147U1 533 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 KLK9Q2XQG4 91 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 LYZL2Q7Z4W2 148 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 ZNF429Q86V71 674 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 FAM219AQ8IW50 185 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 OR2C3Q8N628 320 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 IL22RA2Q969J5 263 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 CCDC32Q9BV29 185 aa7.74□□□□□ -1.17
RFX3-210ENST00000457373 PLEKHA3Q9HB20 300 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms