RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SNRNP70P08621 437 aaKnown RBP12.14□□□□□ -0.47
ACTB-204ENST00000425660 PAX6P26367 422 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 PVRIGQ6DKI7 326 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 ZNF114Q8NC26 417 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 RPRMQ9NS64 109 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 HECTD1Q9ULT8 2610 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 KRBOX1C9JBD0 128 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 SOX15O60248 233 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 TSPAN15O95858 294 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 ZP3P21754 424 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 RPL27AP46776 148 aaKnown RBP12.14□□□□□ -0.47
ACTB-204ENST00000425660 TNXAQ16473 311 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 DEFB113Q30KQ7 82 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 MRPL41Q8IXM3 137 aaKnown RBP12.14□□□□□ -0.47
ACTB-204ENST00000425660 MAP1AP78559 2803 aaPredicted RBP12.13□□□□□ -0.47
ACTB-204ENST00000425660 POLQO75417 2590 aa12.13□□□□□ -0.47
ACTB-204ENST00000425660 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
ACTB-204ENST00000425660 C17orf112F2Z3M2 114 aa12.13□□□□□ -0.47
ACTB-204ENST00000425660 GATA3P23771 443 aa12.13□□□□□ -0.47
ACTB-204ENST00000425660 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
ACTB-204ENST00000425660 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
ACTB-204ENST00000425660 RNASEH2CQ8TDP1 164 aaKnown RBP12.13□□□□□ -0.47
ACTB-204ENST00000425660 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
ACTB-204ENST00000425660 P2RX4Q99571 388 aa12.13□□□□□ -0.47
ACTB-204ENST00000425660 SRSF8Q9BRL6 282 aaKnown RBP12.13□□□□□ -0.47
ACTB-204ENST00000425660 TRAV1-1A0A0B4J248 108 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 FCN1O00602 326 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 MBP02144 154 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 H2AFB1P0C5Y9 115 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 OR13C7P0DN81 318 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 CD24P25063 80 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 SUB1P53999 127 aaKnown RBP eCLIP12.12□□□□□ -0.473e-16■■□□□ 12.8
ACTB-204ENST00000425660 HNF4GQ14541 408 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 TMEM41BQ5BJD5 291 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 SPSB3Q6PJ21 355 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 ZNF709Q8N972 641 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 APCP25054 2843 aa12.12□□□□□ -0.47
ACTB-204ENST00000425660 IGHV1-69DA0A0B4J2H0 117 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 IGHV1-69P01742 117 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 FAM106CPP0CH98 169 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 CD69Q07108 199 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 HES1Q14469 280 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 PLGLAQ15195 96 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 C5orf64Q2M2E5 130 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 TEPPQ6URK8 271 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 ABCA12Q86UK0 2595 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 SRSF12Q8WXF0 261 aaKnown RBP12.11□□□□□ -0.47
ACTB-204ENST00000425660 MBD6Q96DN6 1003 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 LINC00052Q96N35 136 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 TRAV20A0A0B4J274 112 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 SMCO3A2RU48 225 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 CD5P06127 495 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 BRS3P32247 399 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 GPX4P36969 197 aaPredicted RBP12.11□□□□□ -0.47
ACTB-204ENST00000425660 OPRK1P41145 380 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 SRSF3P84103 164 aaKnown RBP12.11□□□□□ -0.47
ACTB-204ENST00000425660 LOXL1Q08397 574 aaPredicted RBP12.11□□□□□ -0.47
ACTB-204ENST00000425660 ZNF726P1Q15940 193 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 TMEM144Q7Z5S9 345 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 RPP25LQ8N5L8 163 aaKnown RBP12.11□□□□□ -0.47
ACTB-204ENST00000425660 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 MGST2Q99735 147 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 SCRT1Q9BWW7 348 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
ACTB-204ENST00000425660 AREGP15514 252 aa12.1□□□□□ -0.47
ACTB-204ENST00000425660 BPIFCQ8NFQ6 507 aa12.1□□□□□ -0.47
ACTB-204ENST00000425660 RCC1LQ96I51 464 aaKnown RBP12.1□□□□□ -0.47
ACTB-204ENST00000425660 GGTLC1Q9BX51 225 aa12.1□□□□□ -0.47
ACTB-204ENST00000425660 HIF1ANQ9NWT6 349 aa12.1□□□□□ -0.47
ACTB-204ENST00000425660 CSMD1Q96PZ7 3565 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 TRAV40A0A0B4J280 105 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 AGPAT2O15120 278 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 HBE1P02100 147 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
ACTB-204ENST00000425660 GNB1P62873 340 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 GAMTQ14353 236 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 LINC01356Q8N9X3 169 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 KCNIP2Q9NS61 270 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 TMEM218A2RU14 115 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 TMEM11P17152 192 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 M6PRP20645 277 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 RAB2AP61019 212 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 FFAR4Q5NUL3 377 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 PRSS57Q6UWY2 283 aa12.09□□□□□ -0.47
ACTB-204ENST00000425660 PLXNB1O43157 2135 aa12.08□□□□□ -0.47
ACTB-204ENST00000425660 NAV3Q8IVL0 2385 aa12.08□□□□□ -0.47
ACTB-204ENST00000425660 IGKV1OR2-108A0A075B7D4 117 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms