RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 WDR82Q6UXN9 313 aa13.7□□□□□ -0.22
NPC1L1-203ENST00000423141 SPACA3Q8IXA5 215 aa13.7□□□□□ -0.22
NPC1L1-203ENST00000423141 CT55Q8WUE5 264 aa13.7□□□□□ -0.22
NPC1L1-203ENST00000423141 NANOS1Q8WY41 292 aaKnown RBP13.7□□□□□ -0.22
NPC1L1-203ENST00000423141 ST6GALNAC6Q969X2 333 aa13.7□□□□□ -0.22
NPC1L1-203ENST00000423141 HINT2Q9BX68 163 aa13.7□□□□□ -0.22
NPC1L1-203ENST00000423141 FZR1Q9UM11 496 aa13.7□□□□□ -0.22
NPC1L1-203ENST00000423141 FAM90A9PA6NNJ1 464 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 IQCF6A8MYZ5 107 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 SELENOVP59797 346 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 IGF2BP2-AS1Q96M15 143 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 NABP2Q9BQ15 211 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 CFIP05156 583 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 GPR6P46095 362 aaPredicted RBP13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 CDKN1BP46527 198 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 COTL1Q14019 142 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 MORN2Q502X0 79 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 KLF14Q8TD94 323 aaPredicted RBP13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 LEAP2Q969E1 77 aa13.69□□□□□ -0.22
NPC1L1-203ENST00000423141 IGKV1OR2-108A0A075B7D4 117 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 TRAV9-2A0A087WT02 112 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 IGHV2-70DA0A0C4DH43 119 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 ITGB1BP1O14713 200 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 GABRA6Q16445 453 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 ETFRF1Q6IPR1 90 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 CD177Q8N6Q3 437 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 NEUROG1Q92886 237 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 SPENQ96T58 3664 aaKnown RBP13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 MED13Q9UHV7 2174 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 IZUMO1RA6ND01 250 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 M0QZ24 198 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 RPL8P62917 257 aaKnown RBP13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 RAB31Q13636 194 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 LINC00696Q6ZRV3 163 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 LOXL4Q96JB6 756 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 S1PR3Q99500 378 aa13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 SSBP4Q9BWG4 385 aaPredicted RBP13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 ZNF331Q9NQX6 463 aaPredicted RBP13.68□□□□□ -0.22
NPC1L1-203ENST00000423141 C15orf61A6NNL5 157 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 M0R2Z0 102 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 HSBP1O75506 76 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 PLGLB1Q02325 96 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 PMCHL1Q16048 86 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 COX19Q49B96 90 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 OR4C5Q8NGB2 326 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 TMEM167BQ9NRX6 74 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 TRGV8A0A0C4DH27 118 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 IGHV1-69-2A0A0G2JMI3 117 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 A0A1W2PN81 502 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 PATE3B3GLJ2 98 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 ADH4P08319 380 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 TNFSF4P23510 183 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 PPOXP50336 477 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 RNASEKQ6P5S7 137 aaKnown RBP13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 FAM90A1Q86YD7 464 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 IFI27L2Q9H2X8 130 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 PLEKHA3Q9HB20 300 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 ZNF355PQ9NSJ1 428 aa13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 SLC25A10Q9UBX3 287 aaPredicted RBP13.67□□□□□ -0.22
NPC1L1-203ENST00000423141 H0YJW9 148 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 LYZL6O75951 148 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 MFAP2P55001 183 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 MUC15Q8N387 334 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 PRR7Q8TB68 274 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 CLEC5AQ9NY25 188 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 MRPL27Q9P0M9 148 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 C2orf70A6NJV1 201 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 TNFSF15O95150 251 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 MRPL49Q13405 166 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 SSPNQ14714 243 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 TBR1Q16650 682 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 MLANAQ16655 118 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 OR8B3Q8NGG8 313 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 OR8B2Q96RD0 313 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 TNFRSF19Q9NS68 423 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 RNF24Q9Y225 148 aa13.66□□□□□ -0.22
NPC1L1-203ENST00000423141 SH2D7A6NKC9 451 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 ZNF891A8MT65 544 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 MORN5Q5VZ52 161 aa13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 OR5B3Q8NH48 314 aa13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 CLCF1Q9UBD9 225 aa13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 UBE2G1P62253 170 aa13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 ABHD17BQ5VST6 288 aa13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 PILRBQ9UKJ0 227 aa13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 ARL2-SNX15V9GYD0 113 aa13.65□□□□□ -0.22
NPC1L1-203ENST00000423141 KNTC1P50748 2209 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 TRAV5A0A0B4J249 113 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 VAMP3Q15836 100 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 DUSP13Q9UII6 198 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 LOC400499M0QZD8 3231 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 LOXL3P58215 753 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 HSPE1P61604 102 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 ARG2P78540 354 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 MPV17L2Q567V2 206 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 NUP35Q8NFH5 326 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 DDB2Q92466 427 aa13.64□□□□□ -0.23
NPC1L1-203ENST00000423141 TMEM14BQ9NUH8 114 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms