RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 PI3P19957 117 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 MFAP2P55001 183 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 UCP3P55916 312 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 CTF1Q16619 201 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 ANKRD55Q3KP44 614 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 RNASE10Q5GAN6 216 aaKnown RBP6.98□□□□□ -1.29
NUP50-206ENST00000422489 LINC00322Q6ZN03 302 aaPredicted RBP6.98□□□□□ -1.29
NUP50-206ENST00000422489 OR1L6Q8NGR2 347 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 OR52I2Q8NH67 350 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 MARC2Q969Z3 335 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 MISP3Q96FF7 219 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 CHRDL1Q9BU40 450 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 EDA2RQ9HAV5 297 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 GAR1Q9NY12 217 aaKnown RBP6.98□□□□□ -1.29
NUP50-206ENST00000422489 KLK11Q9UBX7 282 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 A8MWP6 167 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 RGS5O15539 181 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 YIF1AO95070 293 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 IGKV1-39P01597 117 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 IGHV3-48P01763 117 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 IGKV1D-39P04432 117 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 FGF2P09038 288 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 ELLP55199 621 aaPredicted RBP6.97□□□□□ -1.29
NUP50-206ENST00000422489 ERHP84090 104 aaKnown RBP6.97□□□□□ -1.29
NUP50-206ENST00000422489 IZUMO4Q1ZYL8 232 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 SCGB2B2Q4G0G5 96 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 SPINK9Q5DT21 86 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 LAMTOR1Q6IAA8 161 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 GPR141Q7Z602 305 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 CADM3Q8N126 398 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 OR2C3Q8N628 320 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 OR5B3Q8NH48 314 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 MRGPRFQ96AM1 343 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 PINX1Q96BK5 328 aaKnown RBP6.97□□□□□ -1.29
NUP50-206ENST00000422489 BSCL2Q96G97 398 aaPredicted RBP6.97□□□□□ -1.29
NUP50-206ENST00000422489 SEC22AQ96IW7 307 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 ABHD1Q96SE0 405 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 ZNF436Q9C0F3 470 aaPredicted RBP6.97□□□□□ -1.29
NUP50-206ENST00000422489 HIPK2Q9H2X6 1198 aa6.97□□□□□ -1.29
NUP50-206ENST00000422489 TRAV25A0A0B4J276 109 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 C15orf61A6NNL5 157 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 K7EIM0 57 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 GABARAPO95166 117 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 RAB3DO95716 219 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 SMIM18P0DKX4 95 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 C8orf88P0DMB2 117 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 PPP5CP53041 499 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 MFAP4P55083 255 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 PIGPP57054 158 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 HSPE1P61604 102 aaKnown RBP6.96□□□□□ -1.3
NUP50-206ENST00000422489 TRIM16LQ309B1 348 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 SP6Q3SY56 376 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 SPSB3Q6PJ21 355 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 OR1P1Q8NH06 330 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 ZFAND1Q8TCF1 268 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 C15orf40Q8WUR7 153 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 MRPS26Q9BYN8 205 aaKnown RBP6.96□□□□□ -1.3
NUP50-206ENST00000422489 FAM212BQ9NTI7 297 aaPredicted RBP6.96□□□□□ -1.3
NUP50-206ENST00000422489 TMEM14BQ9NUH8 114 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 COPZ2Q9P299 210 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 UBQLN2Q9UHD9 624 aa6.96□□□□□ -1.3
NUP50-206ENST00000422489 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
NUP50-206ENST00000422489 IGHV3-49A0A0A0MS15 119 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 C3orf85A0A1B0GTC6 90 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 NDUFA4O00483 81 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 CTDSP2O14595 271 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 NUPL2O15504 423 aaKnown RBP6.95□□□□□ -1.3
NUP50-206ENST00000422489 ATG12O94817 140 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 MT-CO2P00403 227 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 IFNA17P01571 189 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 CTSGP08311 255 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 ADMP35318 185 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 SNCAP37840 140 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 PRCDQ00LT1 54 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 STEAP1BQ6NZ63 245 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 CLVS1Q8IUQ0 354 aaPredicted RBP6.95□□□□□ -1.3
NUP50-206ENST00000422489 ARRDC1Q8N5I2 433 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 TMEM229BQ8NBD8 167 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 OR4D10Q8NGI6 311 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 TERB2Q8NHR7 220 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 RNASE11Q8TAA1 199 aaKnown RBP6.95□□□□□ -1.3
NUP50-206ENST00000422489 TMEM190Q8WZ59 177 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 ZNF486Q96H40 463 aaPredicted RBP6.95□□□□□ -1.3
NUP50-206ENST00000422489 TP53RKQ96S44 253 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 PDCD10Q9BUL8 212 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 GGTLC1Q9BX51 225 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 MIXL1Q9H2W2 232 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 C5orf66Q9H5L9 145 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 MTFP1Q9UDX5 166 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 SORL1Q92673 2214 aa6.95□□□□□ -1.3
NUP50-206ENST00000422489 IGKV3-7A0A075B6H7 116 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 I3L2K1 104 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 K7EMT4 169 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 GNG7O60262 68 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 IGKV1-5P01602 117 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 CTSDP07339 412 aaPredicted RBP6.94□□□□□ -1.3
NUP50-206ENST00000422489 ETV6P41212 452 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 TFPI2P48307 235 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 AKR1C2P52895 323 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 TAS2R19P59542 299 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms