RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PEMTQ9UBM1 199 aa20.13■□□□□ 0.81
CDK9-202ENST00000421939 LSM4Q9Y4Z0 139 aaKnown RBP20.13■□□□□ 0.81
CDK9-202ENST00000421939 CRYM-AS1A6NIL9 109 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 CSN3P07498 182 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 FAUP35544 74 aaKnown RBP20.12■□□□□ 0.81
CDK9-202ENST00000421939 MFAP2P55001 183 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 AP3S2P59780 193 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 HSPE1P61604 102 aaKnown RBP20.12■□□□□ 0.81
CDK9-202ENST00000421939 PRCDQ00LT1 54 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 SLC25A24Q6NUK1 477 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 ZNF502Q8TBZ5 544 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 SIGLEC8Q9NYZ4 499 aa20.12■□□□□ 0.81
CDK9-202ENST00000421939 OR2C1O95371 312 aa20.11■□□□□ 0.81
CDK9-202ENST00000421939 GP9P14770 177 aa20.11■□□□□ 0.81
CDK9-202ENST00000421939 SPANXN2Q5MJ10 180 aa20.11■□□□□ 0.81
CDK9-202ENST00000421939 RNASE11Q8TAA1 199 aaKnown RBP20.11■□□□□ 0.81
CDK9-202ENST00000421939 VN1R17PQ8TDU5 208 aa20.11■□□□□ 0.81
CDK9-202ENST00000421939 RRNAD1Q96FB5 475 aaKnown RBP20.11■□□□□ 0.81
CDK9-202ENST00000421939 SCGB3A2Q96PL1 93 aa20.11■□□□□ 0.81
CDK9-202ENST00000421939 DNAH9Q9NYC9 4486 aa20.11■□□□□ 0.81
CDK9-202ENST00000421939 ETV6P41212 452 aa20.1■□□□□ 0.81
CDK9-202ENST00000421939 TOMM5Q8N4H5 51 aa20.1■□□□□ 0.81
CDK9-202ENST00000421939 OR1L6Q8NGR2 347 aa20.1■□□□□ 0.81
CDK9-202ENST00000421939 GLYATL2Q8WU03 294 aa20.1■□□□□ 0.81
CDK9-202ENST00000421939 B9D2Q9BPU9 175 aa20.1■□□□□ 0.81
CDK9-202ENST00000421939 PLEKHA3Q9HB20 300 aa20.1■□□□□ 0.81
CDK9-202ENST00000421939 A0A0B4J293 547 aa20.09■□□□□ 0.81
CDK9-202ENST00000421939 CDS2O95674 445 aa20.09■□□□□ 0.81
CDK9-202ENST00000421939 GPR183P32249 361 aa20.09■□□□□ 0.81
CDK9-202ENST00000421939 DHODHQ02127 395 aa20.09■□□□□ 0.81
CDK9-202ENST00000421939 OR2C3Q8N628 320 aa20.09■□□□□ 0.81
CDK9-202ENST00000421939 OR1P1Q8NH06 330 aa20.09■□□□□ 0.81
CDK9-202ENST00000421939 COL7A1Q02388 2944 aa20.09■□□□□ 0.81
CDK9-202ENST00000421939 A0A0G2JRQ6 117 aa20.08■□□□□ 0.81
CDK9-202ENST00000421939 CLEC3BP05452 202 aa20.08■□□□□ 0.81
CDK9-202ENST00000421939 CD69Q07108 199 aa20.08■□□□□ 0.81
CDK9-202ENST00000421939 GPHB5Q86YW7 130 aa20.08■□□□□ 0.81
CDK9-202ENST00000421939 SGPP2Q8IWX5 399 aa20.08■□□□□ 0.81
CDK9-202ENST00000421939 LHFPL5Q8TAF8 219 aa20.08■□□□□ 0.81
CDK9-202ENST00000421939 RBPMSQ93062 196 aaKnown RBP20.08■□□□□ 0.81
CDK9-202ENST00000421939 NDUFA13Q9P0J0 144 aa20.08■□□□□ 0.81
CDK9-202ENST00000421939 LGALS9O00182 355 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 ST8SIA3O43173 380 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 SPINK9Q5DT21 86 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 FAM219AQ8IW50 185 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 SLC35G3Q8N808 338 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 ZNF114Q8NC26 417 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 TMEM230Q96A57 120 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 SRRQ9GZT4 340 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 ZC4H2Q9NQZ6 224 aa20.07■□□□□ 0.8
CDK9-202ENST00000421939 K7EIM0 57 aa20.06■□□□□ 0.8
CDK9-202ENST00000421939 DEDD2Q8WXF8 326 aa20.06■□□□□ 0.8
CDK9-202ENST00000421939 PDCD10Q9BUL8 212 aa20.06■□□□□ 0.8
CDK9-202ENST00000421939 C21orf62Q9NYP8 219 aa20.06■□□□□ 0.8
CDK9-202ENST00000421939 SMAD5-AS1Q9Y6J3 95 aa20.06■□□□□ 0.8
CDK9-202ENST00000421939 IGHV3-21A0A0B4J1V1 117 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 IFNA17P01571 189 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 ERHP84090 104 aaKnown RBP20.05■□□□□ 0.8
CDK9-202ENST00000421939 FAM106AQ4KMX7 169 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 TMEM268Q5VZI3 342 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 ADAMTSL5Q6ZMM2 481 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 SELENOHQ8IZQ5 122 aaKnown RBP20.05■□□□□ 0.8
CDK9-202ENST00000421939 SCARB1Q8WTV0 552 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 GALNT14Q96FL9 552 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 KCNIP3Q9Y2W7 256 aa20.05■□□□□ 0.8
CDK9-202ENST00000421939 C2orf70A6NJV1 201 aa20.04■□□□□ 0.8
CDK9-202ENST00000421939 TGOLN2O43493 480 aa20.04■□□□□ 0.8
CDK9-202ENST00000421939 LCN12Q6JVE5 192 aa20.04■□□□□ 0.8
CDK9-202ENST00000421939 PLET1Q6UQ28 207 aa20.04■□□□□ 0.8
CDK9-202ENST00000421939 DYNLRB2Q8TF09 96 aa20.04■□□□□ 0.8
CDK9-202ENST00000421939 ATP6V0BQ99437 205 aa20.04■□□□□ 0.8
CDK9-202ENST00000421939 TMEM56-RWDD3S4R434 201 aa20.04■□□□□ 0.8
CDK9-202ENST00000421939 ZNF320A2RRD8 509 aa20.03■□□□□ 0.8
CDK9-202ENST00000421939 OR2T8A6NH00 312 aa20.03■□□□□ 0.8
CDK9-202ENST00000421939 A8MWP6 167 aa20.03■□□□□ 0.8
CDK9-202ENST00000421939 MISP3Q96FF7 219 aa20.03■□□□□ 0.8
CDK9-202ENST00000421939 BSCL2Q96G97 398 aaPredicted RBP20.03■□□□□ 0.8
CDK9-202ENST00000421939 INS-IGF2F8WCM5 200 aa20.02■□□□□ 0.8
CDK9-202ENST00000421939 FOLR2P14207 255 aa20.02■□□□□ 0.8
CDK9-202ENST00000421939 AKR1C4P17516 323 aa20.02■□□□□ 0.8
CDK9-202ENST00000421939 HOXA1P49639 335 aaPredicted RBP20.02■□□□□ 0.8
CDK9-202ENST00000421939 TMEM187Q14656 261 aa20.02■□□□□ 0.8
CDK9-202ENST00000421939 ZNF57Q68EA5 555 aaPredicted RBP20.02■□□□□ 0.8
CDK9-202ENST00000421939 Q6ZRM9 215 aa20.02■□□□□ 0.8
CDK9-202ENST00000421939 OR2K2Q8NGT1 345 aa20.02■□□□□ 0.8
CDK9-202ENST00000421939 IL22RA2Q969J5 263 aa20.02■□□□□ 0.8
CDK9-202ENST00000421939 TMEM213A2RRL7 107 aa20.01■□□□□ 0.79
CDK9-202ENST00000421939 EDN2P20800 178 aa20.01■□□□□ 0.79
CDK9-202ENST00000421939 SUPT4H1P63272 117 aaKnown RBP20.01■□□□□ 0.79
CDK9-202ENST00000421939 AARDQ4LEZ3 155 aa20.01■□□□□ 0.79
CDK9-202ENST00000421939 SPSB3Q6PJ21 355 aa20.01■□□□□ 0.79
CDK9-202ENST00000421939 PRR13Q9NZ81 148 aa20.01■□□□□ 0.79
CDK9-202ENST00000421939 CACNG5Q9UF02 275 aa20.01■□□□□ 0.79
CDK9-202ENST00000421939 IGHV3-35A0A0C4DH35 117 aa20■□□□□ 0.79
CDK9-202ENST00000421939 IZUMO1RA6ND01 250 aa20■□□□□ 0.79
CDK9-202ENST00000421939 F8W735 103 aaPredicted RBP20■□□□□ 0.79
CDK9-202ENST00000421939 I3L2K1 104 aa20■□□□□ 0.79
CDK9-202ENST00000421939 SNCAP37840 140 aa20■□□□□ 0.79
CDK9-202ENST00000421939 Q56UQ5 140 aa20■□□□□ 0.79
CDK9-202ENST00000421939 TRIQKQ629K1 86 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms