RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TRAV6A0A075B6T7 132 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 A0A0G2JLM5 398 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 CENPXA8MT69 81 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 PPP5D1E7EU14 171 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 LINC01619G3V211 115 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 B3GALNT1O75752 331 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 SFT2D2O95562 160 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 HLA-AP01891 365 aaKnown RBP5.93□□□□□ -1.46
CPSF4-202ENST00000412686 HSPB1P04792 205 aaKnown RBP5.93□□□□□ -1.46
CPSF4-202ENST00000412686 FGF2P09038 288 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 DEFA4P12838 97 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 HOXD3P31249 432 aaPredicted RBP5.93□□□□□ -1.46
CPSF4-202ENST00000412686 HSPE1P61604 102 aaKnown RBP5.93□□□□□ -1.46
CPSF4-202ENST00000412686 PRCDQ00LT1 54 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 ATP5G2Q06055 141 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 ZNF846Q147U1 533 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 BEAN1Q3B7T3 259 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM128Q5BJH2 165 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 ZNF343Q6P1L6 599 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 ZNF429Q86V71 674 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 SLC25A42Q86VD7 318 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 NECAP1Q8NC96 275 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 OR52B4Q8NGK2 314 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 OR5B3Q8NH48 314 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 CCDC140Q96MF4 163 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 C7orf50Q9BRJ6 194 aaKnown RBP5.93□□□□□ -1.46
CPSF4-202ENST00000412686 WDR12Q9GZL7 423 aaKnown RBP5.93□□□□□ -1.46
CPSF4-202ENST00000412686 ZC4H2Q9NQZ6 224 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 PEF1Q9UBV8 284 aaKnown RBP5.93□□□□□ -1.46
CPSF4-202ENST00000412686 KCNIP3Q9Y2W7 256 aa5.93□□□□□ -1.46
CPSF4-202ENST00000412686 CMYA5Q8N3K9 4069 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.92□□□□□ -1.46
CPSF4-202ENST00000412686 A0A0B4J2A0 478 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 FAM223BA6NKX1 122 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 BMPR1BO00238 502 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 UPK1BO75841 260 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 ATG12O94817 140 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 IFNA17P01571 189 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 OR8U8P0C7N1 319 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 ANXA3P12429 323 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 EDN2P20800 178 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 KRTAP10-11P60412 298 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 UBE2MP61081 183 aaKnown RBP5.92□□□□□ -1.46
CPSF4-202ENST00000412686 DEFA6Q01524 100 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 KLK9Q2XQG4 91 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 NMSQ5H8A3 153 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 THOC7Q6I9Y2 204 aaKnown RBP5.92□□□□□ -1.46
CPSF4-202ENST00000412686 SLC25A24Q6NUK1 477 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 CLEC19AQ6UXS0 136 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 HAPLN4Q86UW8 402 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 FAM219AQ8IW50 185 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 FAM223AQ8IWN6 122 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 LGI3Q8N145 548 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 OR2C3Q8N628 320 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 IL22RA2Q969J5 263 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 USMG5Q96IX5 58 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 SRSF8Q9BRL6 282 aaKnown RBP5.92□□□□□ -1.46
CPSF4-202ENST00000412686 C20orf85Q9H1P6 137 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 PLEKHA3Q9HB20 300 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 RANGRFQ9HD47 186 aaPredicted RBP5.92□□□□□ -1.46
CPSF4-202ENST00000412686 FKBP11Q9NYL4 201 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 SHPKQ9UHJ6 478 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 KLK9Q9UKQ9 250 aa5.92□□□□□ -1.46
CPSF4-202ENST00000412686 F11RQ9Y624 299 aaKnown RBP5.92□□□□□ -1.46
CPSF4-202ENST00000412686 C9orf170A2RU37 121 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 MPTX1A8MV57 137 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 SEC14L6B5MCN3 397 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 K7EIM0 57 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 OVOL1O14753 267 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 ADAP1O75689 374 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 DHFRP00374 187 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 IGHV3-48P01763 117 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 TCRBP04435 133 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 HOXB5P09067 269 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 OR4E1P0C645 316 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 SULT1A3P0DMM9 295 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 SULT1A4P0DMN0 295 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 HOXA1P49639 335 aaPredicted RBP5.91□□□□□ -1.46
CPSF4-202ENST00000412686 SYNJ2BPP57105 145 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 DHRS2Q13268 280 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 HSD17B13Q7Z5P4 300 aaPredicted RBP5.91□□□□□ -1.46
CPSF4-202ENST00000412686 PINX1Q96BK5 328 aaKnown RBP5.91□□□□□ -1.46
CPSF4-202ENST00000412686 MISP3Q96FF7 219 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 RCC1LQ96I51 464 aaKnown RBP5.91□□□□□ -1.46
CPSF4-202ENST00000412686 PDCD10Q9BUL8 212 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.91□□□□□ -1.46
CPSF4-202ENST00000412686 NUDT15Q9NV35 164 aa5.91□□□□□ -1.46
CPSF4-202ENST00000412686 IGHV3-35A0A0C4DH35 117 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 FAM240BA0A1B0GVZ2 78 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 F8W735 103 aaPredicted RBP5.9□□□□□ -1.46
CPSF4-202ENST00000412686 OR2C1O95371 312 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 RNASE2P10153 161 aaKnown RBP5.9□□□□□ -1.46
CPSF4-202ENST00000412686 HIST1H1BP16401 226 aaKnown RBP5.9□□□□□ -1.46
CPSF4-202ENST00000412686 ZP3P21754 424 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 GPR183P32249 361 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 SPCS3P61009 180 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 SRPXP78539 464 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 ERHP84090 104 aaKnown RBP5.9□□□□□ -1.46
CPSF4-202ENST00000412686 ASAH1Q13510 395 aa5.9□□□□□ -1.46
CPSF4-202ENST00000412686 SMCO1Q147U7 214 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms