RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 TRBV7-1A0A0A6YYK4 115 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 OR11H12B2RN74 326 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 HLA-DQB1P01920 261 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 UBE2E1P51965 193 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 FOXB2Q5VYV0 432 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 LCN12Q6JVE5 192 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 LYPD2Q6UXB3 125 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 HEPN1Q6WQI6 88 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 OR8A1Q8NGG7 326 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 GATAD1Q8WUU5 269 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 GLMPQ8WWB7 406 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 KCNS1Q96KK3 526 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 TP53RKQ96S44 253 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 TXNDC17Q9BRA2 123 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 ZMAT4Q9H898 229 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 PLSCR2Q9NRY7 297 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 B4DEV8 164 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 PSMB2P49721 201 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 OR11H4Q8NGC9 324 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 OR9G4Q8NGQ1 327 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 C2CD4CQ8TF44 421 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 SLC25A38Q96DW6 304 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 KIR2DL4Q99706 377 aa4.15□□□□□ -1.74
SCN3A-203ENST00000409101 TRAF4Q9BUZ4 470 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-203ENST00000409101 TRBV6-7A0A0A0MS04 114 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 M0R3E3 92 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 GCGP01275 180 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 MALP21145 153 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 SULT1A2P50226 295 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 ASCL4Q6XD76 172 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 CACNG8Q8WXS5 425 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 RGP1Q92546 391 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-203ENST00000409101 SLX1AQ9BQ83 275 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 MAP1LC3AQ9H492 121 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 PRDM13Q9H4Q3 707 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 C5orf66Q9H5L9 145 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 C15orf61A6NNL5 157 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 IER3P46695 156 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 EFNB3Q15768 340 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 AANATQ16613 207 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 CFAP161Q6P656 301 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 ST6GAL2Q96JF0 529 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 SGK494Q96LW2 274 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 GSX1Q9H4S2 264 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-203ENST00000409101 FUT9Q9Y231 359 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 TDRD6O60522 2096 aaKnown RBP4.15□□□□□ -1.75
SCN3A-203ENST00000409101 TNFSF13O75888 250 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 BCL2P10415 239 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 IGFBP2P18065 325 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 RPS11P62280 158 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN3A-203ENST00000409101 C2orf83Q53S99 150 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 COPS9Q8WXC6 57 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 OR5AC2Q9NZP5 309 aa4.15□□□□□ -1.75
SCN3A-203ENST00000409101 NYNRINQ9P2P1 1898 aaKnown RBP4.15□□□□□ -1.75
SCN3A-203ENST00000409101 SIP14410 1827 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 PPP1R17O96001 155 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 CD74P04233 296 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF329Q86UD4 541 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 GEMIN7Q9H840 131 aaKnown RBP4.14□□□□□ -1.75
SCN3A-203ENST00000409101 AURKAIP1Q9NWT8 199 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-203ENST00000409101 OVOL1O14753 267 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 NDUFB4O95168 129 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 PRTN3P24158 256 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 C15orf32Q32M92 178 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 SPSB3Q6PJ21 355 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 C1orf122Q6ZSJ8 110 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 SLC25A48Q6ZT89 311 aaKnown RBP4.14□□□□□ -1.75
SCN3A-203ENST00000409101 RNF125Q96EQ8 232 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 PRADC1Q9BSG0 188 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 C1QTNF4Q9BXJ3 329 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 MBNL3Q9NUK0 354 aaKnown RBP4.14□□□□□ -1.75
SCN3A-203ENST00000409101 ANKRD12Q6UB98 2062 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF253O75346 499 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 CD7P09564 240 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 SELLP14151 372 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF345Q14585 488 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 LYRM7Q5U5X0 104 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM88Q6PEY1 159 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 NR2C2APQ86WQ0 139 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 VAMP8Q9BV40 100 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 TRIOBPQ9H2D6 2365 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 M0R381 172 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 PSPNO60542 156 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 CFHR2P36980 270 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 HGFACQ04756 655 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 HIST3H3Q16695 136 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 C2orf68Q2NKX9 166 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 PAPPA-AS1Q5QFB9 102 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 SIGIRRQ6IA17 410 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 OR52E5Q8NH55 327 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 HIST1H2BAQ96A08 127 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 SPSB4Q96A44 273 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 BET1LQ9NYM9 111 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 PEF1Q9UBV8 284 aaKnown RBP4.14□□□□□ -1.75
SCN3A-203ENST00000409101 ANK1P16157 1881 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 IGFBP3P17936 291 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-203ENST00000409101 GCHFRP30047 84 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 MEIG1Q5JSS6 88 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF502Q8TBZ5 544 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM158Q8WZ71 300 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms