RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 TRAPPC1Q9Y5R8 145 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 DOPEY1Q5JWR5 2465 aa12.46□□□□□ -0.42
LIMK2-204ENST00000406516 GCHFRP30047 84 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 HSPE1P61604 102 aaKnown RBP12.45□□□□□ -0.42
LIMK2-204ENST00000406516 MRPS11P82912 194 aaKnown RBP12.45□□□□□ -0.42
LIMK2-204ENST00000406516 IDI2-AS1Q9NZ38 188 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 TRGV10A0A0A0MS01 117 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 FOXH1O75593 365 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 THBS3P49746 956 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 RPL15P61313 204 aaKnown RBP12.45□□□□□ -0.42
LIMK2-204ENST00000406516 TIMM23BQ5SRD1 257 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 TMEM14BQ9NUH8 114 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
LIMK2-204ENST00000406516 A0A1B0GUS0 222 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 IGFBP2P18065 325 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 TCF23Q7RTU1 214 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
LIMK2-204ENST00000406516 PLCE1Q9P212 2302 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 SPTAN1Q13813 2472 aaKnown RBP12.44□□□□□ -0.42
LIMK2-204ENST00000406516 UTP20O75691 2785 aaKnown RBP12.44□□□□□ -0.42
LIMK2-204ENST00000406516 ACTL6BO94805 426 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 RHOBP62745 196 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 C22orf34Q6ZV56 151 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 MRPL41Q8IXM3 137 aaKnown RBP12.44□□□□□ -0.42
LIMK2-204ENST00000406516 TMEM18Q96B42 140 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 CCL13Q99616 98 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 ELOVL5Q9NYP7 299 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 ZNRD1Q9P1U0 126 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 C19orf84I3L1E1 186 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 MMP23AO75900 390 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 RPL31P62899 125 aaKnown RBP12.44□□□□□ -0.42
LIMK2-204ENST00000406516 FOXL1Q12952 345 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 REC114Q7Z4M0 266 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 FAM216BQ8N7L0 139 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 OR4P4Q8NGL7 312 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 TXNDC17Q9BRA2 123 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 GCM1Q9NP62 436 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 RNF7Q9UBF6 113 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 OR51B2Q9Y5P1 312 aa12.44□□□□□ -0.42
LIMK2-204ENST00000406516 CCKARP32238 428 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 TNFAIP6P98066 277 aaPredicted RBP12.43□□□□□ -0.42
LIMK2-204ENST00000406516 RAB31Q13636 194 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 FBXL19-AS1Q494R0 122 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 DSCAML1Q8TD84 2053 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 ITGB1BP1O14713 200 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 TEX38Q6PEX7 206 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 MOB3BQ86TA1 216 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.43□□□□□ -0.42
LIMK2-204ENST00000406516 OR10G8Q8NGN5 311 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 RNASE6Q93091 150 aaKnown RBP12.43□□□□□ -0.42
LIMK2-204ENST00000406516 IMMP2LQ96T52 175 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 RAB9BQ9NP90 201 aa12.43□□□□□ -0.42
LIMK2-204ENST00000406516 IGLV3-9A0A075B6K5 115 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 A1L4Q6 167 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 STUMQ69YW2 141 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 MIR17HGQ75NE6 70 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 GAFA1Q96PS6 74 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 YLPM1P49750 1951 aaKnown RBP12.42□□□□□ -0.42
LIMK2-204ENST00000406516 GCGP01275 180 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 IGKV1-16P04430 117 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 RPL29P47914 159 aaKnown RBP12.42□□□□□ -0.42
LIMK2-204ENST00000406516 HLA-DRB5Q30154 266 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 TMEM256Q8N2U0 113 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 GBGT1Q8N5D6 347 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 ZNF439Q8NDP4 499 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 FAM222BQ8WU58 562 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 DCAF16Q9NXF7 216 aa12.42□□□□□ -0.42
LIMK2-204ENST00000406516 TNCP24821 2201 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 RAI1Q7Z5J4 1906 aaPredicted RBP12.41□□□□□ -0.42
LIMK2-204ENST00000406516 C16orf97H3BN30 126 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 J3QR06 171 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 K7EN84 100 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 SLC17A3O00476 420 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 IGHV1-46P01743 117 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 BTF3L4Q96K17 158 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 PLEKHA3Q9HB20 300 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 TANC2Q9HCD6 1990 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 GATA4P43694 442 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 ADTRPQ96IZ2 230 aa12.41□□□□□ -0.42
LIMK2-204ENST00000406516 MT-CO2P00403 227 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 ADMP35318 185 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 SELENOVP59797 346 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 PRR20EP86478 221 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 PRR20CP86479 221 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 PRR20DP86480 221 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 PRR20BP86481 221 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 PRR20AP86496 221 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 LINC01560Q8TB33 94 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 SRRM4A7MD48 611 aaKnown RBP12.4□□□□□ -0.42
LIMK2-204ENST00000406516 LINC00869P0C866 280 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 GATA2P23769 480 aaPredicted RBP12.4□□□□□ -0.42
LIMK2-204ENST00000406516 ZNF90Q03938 601 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 NEUROG1Q92886 237 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 UHRF2Q96PU4 802 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 NCOR1P1Q9H4R4 102 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 SLC35D1Q9NTN3 355 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 PRNDQ9UKY0 176 aa12.4□□□□□ -0.42
LIMK2-204ENST00000406516 A0A1B0GV90 55 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms