RNA–Protein interactions for RNA: ENST00000399892.6

SEH1L-202, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best) BASIC

Gene SEH1L, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-202ENST00000399892 SNCAP37840 140 aa13.79□□□□□ -0.2
SEH1L-202ENST00000399892 RGS21Q2M5E4 152 aa13.79□□□□□ -0.2
SEH1L-202ENST00000399892 C12orf45Q8N5I9 185 aaPredicted RBP13.79□□□□□ -0.2
SEH1L-202ENST00000399892 OR52E5Q8NH55 327 aa13.79□□□□□ -0.2
SEH1L-202ENST00000399892 OR5B12Q96R08 314 aa13.79□□□□□ -0.2
SEH1L-202ENST00000399892 SLC25A6P12236 298 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 HIST1H1BP16401 226 aaKnown RBP13.78□□□□□ -0.2
SEH1L-202ENST00000399892 RHOGP84095 191 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 C19orf35Q6ZS72 473 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 THYN1Q9P016 225 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 OR2J3O76001 311 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 BRI3O95415 125 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 IGHV3-11P01762 117 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 SPNP16150 400 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 DEFA5Q01523 94 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 SLC25A24Q6NUK1 477 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 C8orf86Q6ZUL3 223 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 NECAP1Q8NC96 275 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 MYOZ3Q8TDC0 251 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 C4orf3Q8WVX3 66 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 USMG5Q96IX5 58 aa13.78□□□□□ -0.2
SEH1L-202ENST00000399892 ADARB2-AS1A8MUL3 147 aa13.77□□□□□ -0.21
SEH1L-202ENST00000399892 C18orf65Q6ZTR6 163 aa13.77□□□□□ -0.21
SEH1L-202ENST00000399892 OR2C3Q8N628 320 aa13.77□□□□□ -0.21
SEH1L-202ENST00000399892 OR1L6Q8NGR2 347 aa13.77□□□□□ -0.21
SEH1L-202ENST00000399892 HIPK2Q9H2X6 1198 aa13.77□□□□□ -0.21
SEH1L-202ENST00000399892 HEYLQ9NQ87 328 aaPredicted RBP13.77□□□□□ -0.21
SEH1L-202ENST00000399892 FBXL7Q9UJT9 491 aa13.77□□□□□ -0.21
SEH1L-202ENST00000399892 F11RQ9Y624 299 aaKnown RBP13.77□□□□□ -0.21
SEH1L-202ENST00000399892 FAM25EA8MYX2 175 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 PF4P02776 101 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 ATP5G2Q06055 141 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 TNFRSF9Q07011 255 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 GNB4Q9HAV0 340 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 TRBV9A0A0B4J1U6 114 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 SUB1P53999 127 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■■■■ 30.7
SEH1L-202ENST00000399892 KIAA0141Q14154 515 aaPredicted RBP13.76□□□□□ -0.21
SEH1L-202ENST00000399892 IAH1Q2TAA2 248 aaPredicted RBP13.76□□□□□ -0.21
SEH1L-202ENST00000399892 C15orf32Q32M92 178 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 HSPB7Q9UBY9 170 aa13.76□□□□□ -0.21
SEH1L-202ENST00000399892 C5orf51A6NDU8 294 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 MPTX1A8MV57 137 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 CCSO14618 274 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 TSPAN15O95858 294 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 DEFB136Q30KP8 78 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 PDLIM3Q53GG5 364 aaPredicted RBP13.75□□□□□ -0.21
SEH1L-202ENST00000399892 OR1P1Q8NH06 330 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 FANCD2OSQ96PS1 177 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 P2RX4Q99571 388 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 GSKIPQ9P0R6 139 aa13.75□□□□□ -0.21
SEH1L-202ENST00000399892 IGLV11-55A0A075B6I3 123 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 FAM90A26D6RGX4 464 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 PITX3O75364 302 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 MED6O75586 246 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 LGALS1P09382 135 aaKnown RBP13.74□□□□□ -0.21
SEH1L-202ENST00000399892 DTD1Q8TEA8 209 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 INS-IGF2F8WCM5 200 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 WRBO00258 174 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 SSNA1O43805 119 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 EXOSC2Q13868 293 aaKnown RBP13.74□□□□□ -0.21
SEH1L-202ENST00000399892 TATDN3Q17R31 274 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 ZNF114Q8NC26 417 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 DPF1Q92782 380 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 MISP3Q96FF7 219 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 RBKSQ9H477 322 aa13.74□□□□□ -0.21
SEH1L-202ENST00000399892 ANKRD34BA5PLL1 514 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 I3L521 148 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 CCL24O00175 119 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 NDUFB8O95169 186 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 SCGB1D2O95969 90 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 HTR2BP41595 481 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 GSG1LQ6UXU4 331 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 OR11H1Q8NG94 326 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 OR10C1Q96KK4 312 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 CXorf58Q96LI9 332 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 DUX3Q96PT4 197 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 DNHD1Q96M86 4753 aa13.73□□□□□ -0.21
SEH1L-202ENST00000399892 NKX2-1P43699 371 aaPredicted RBP13.72□□□□□ -0.21
SEH1L-202ENST00000399892 RUNX1Q01196 453 aa13.72□□□□□ -0.21
SEH1L-202ENST00000399892 EEF1AKMT3Q96AZ1 226 aa13.72□□□□□ -0.21
SEH1L-202ENST00000399892 PINX1Q96BK5 328 aaKnown RBP13.72□□□□□ -0.21
SEH1L-202ENST00000399892 MAGT1Q9H0U3 335 aa13.72□□□□□ -0.21
SEH1L-202ENST00000399892 TRRAPQ9Y4A5 3859 aa13.72□□□□□ -0.21
SEH1L-202ENST00000399892 VWFP04275 2813 aa13.72□□□□□ -0.21
SEH1L-202ENST00000399892 IFNA10P01566 189 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 MYCNOSP40205 109 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 ZNF616Q08AN1 781 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 ZBTB8BQ8NAP8 495 aaPredicted RBP13.71□□□□□ -0.21
SEH1L-202ENST00000399892 SLC24A4Q8NFF2 622 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 OR1N2Q8NGR9 330 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 RAX2Q96IS3 184 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 S4R3C0 116 aa13.71□□□□□ -0.21
SEH1L-202ENST00000399892 CORTO00230 105 aa13.71□□□□□ -0.22
SEH1L-202ENST00000399892 SYNGR2O43760 224 aa13.71□□□□□ -0.22
SEH1L-202ENST00000399892 IGHV3-23P01764 117 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms