RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TRAV8-2A0A0B4J237 113 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 PLA2G10O15496 165 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 HLA-DQA1P01909 254 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 TMEM250H0YL14 139 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 TRAV14DV4A0A0A6YYC5 116 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 LAMB2P55268 1798 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 RND3P61587 244 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 CLPPQ16740 277 aaPredicted RBP13.75□□□□□ -0.21
RGP1-201ENST00000378078 FER1L6-AS1Q8NA97 138 aa13.75□□□□□ -0.21
RGP1-201ENST00000378078 NEU4Q8WWR8 484 aaPredicted RBP13.74□□□□□ -0.21
RGP1-201ENST00000378078 C5orf66Q9H5L9 145 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 IGHV2OR16-5A0A0B4J2B6 119 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 ATP5G3P48201 142 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 C12orf54Q6X4T0 127 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 FAM57AQ8TBR7 257 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 ZNF48Q96MX3 618 aaPredicted RBP13.74□□□□□ -0.21
RGP1-201ENST00000378078 GPR132Q9UNW8 380 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 PTGDSP41222 190 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 HIST1H4AP62805 103 aaKnown RBP13.74□□□□□ -0.21
RGP1-201ENST00000378078 ACTL10Q5JWF8 245 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 LINC00299Q6ZSB3 139 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 Q6ZT83 130 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 VKORC1Q9BQB6 163 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 ST20Q9HBF5 79 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 RALGAPA1Q6GYQ0 2036 aa13.74□□□□□ -0.21
RGP1-201ENST00000378078 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
RGP1-201ENST00000378078 KNL1Q8NG31 2342 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 RNASE7Q9H1E1 156 aaKnown RBP13.73□□□□□ -0.21
RGP1-201ENST00000378078 UQCR10Q9UDW1 63 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 SLC25A15Q9Y619 301 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 BCORQ6W2J9 1755 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 ZIC4Q8N9L1 334 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 TMEM54Q969K7 222 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 TCF23Q7RTU1 214 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 CGB7P0DN87 165 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 RAG2P55895 527 aa13.73□□□□□ -0.21
RGP1-201ENST00000378078 C8orf82Q6P1X6 216 aaPredicted RBP13.73□□□□□ -0.21
RGP1-201ENST00000378078 RHOGP84095 191 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 PLAC1Q9HBJ0 212 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 CLPSP04118 112 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 VMO1Q7Z5L0 202 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 SLC25A28Q96A46 364 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 FNDC4Q9H6D8 234 aaPredicted RBP13.72□□□□□ -0.21
RGP1-201ENST00000378078 CSRP2Q16527 193 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
RGP1-201ENST00000378078 FUT5Q11128 374 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 OR52E5Q8NH55 327 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 TIMM23BQ5SRD1 257 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 AQP3Q92482 292 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 PILRAQ9UKJ1 303 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 ARFGEF1Q9Y6D6 1849 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 THBDP07204 575 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 PKIBQ9C010 78 aa13.72□□□□□ -0.21
RGP1-201ENST00000378078 TRGV1A0A0A0MS02 117 aa13.71□□□□□ -0.21
RGP1-201ENST00000378078 SEPSECSQ9HD40 501 aaKnown RBP13.71□□□□□ -0.21
RGP1-201ENST00000378078 IGKV2-40A0A087WW87 121 aaPredicted RBP13.71□□□□□ -0.21
RGP1-201ENST00000378078 IGKV2D-40P01614 121 aaPredicted RBP13.71□□□□□ -0.21
RGP1-201ENST00000378078 TMEM105Q8N8V8 129 aa13.71□□□□□ -0.21
RGP1-201ENST00000378078 A0A1B0GV90 55 aa13.71□□□□□ -0.21
RGP1-201ENST00000378078 TMEM187Q14656 261 aa13.71□□□□□ -0.21
RGP1-201ENST00000378078 ZNF837Q96EG3 531 aaPredicted RBP13.71□□□□□ -0.21
RGP1-201ENST00000378078 NPCDR1Q9BY65 106 aa13.71□□□□□ -0.21
RGP1-201ENST00000378078 MRPL32Q9BYC8 188 aaKnown RBP13.71□□□□□ -0.21
RGP1-201ENST00000378078 IFI27L2Q9H2X8 130 aa13.71□□□□□ -0.21
RGP1-201ENST00000378078 GATA4P43694 442 aa13.71□□□□□ -0.22
RGP1-201ENST00000378078 TBR1Q16650 682 aa13.71□□□□□ -0.22
RGP1-201ENST00000378078 FAM110DQ8TAY7 271 aaPredicted RBP13.71□□□□□ -0.22
RGP1-201ENST00000378078 YLPM1P49750 1951 aaKnown RBP13.71□□□□□ -0.22
RGP1-201ENST00000378078 FER1L5A0AVI2 2057 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 LCNL1Q6ZST4 164 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 PAPPA-AS1Q5QFB9 102 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 IGLV1-36A0A0B4J1U3 117 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 IFI27P40305 119 aaPredicted RBP13.7□□□□□ -0.22
RGP1-201ENST00000378078 TMEM155Q4W5P6 130 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 ZNF329Q86UD4 541 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 ANXA2RQ3ZCQ2 193 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 LAMTOR3Q9UHA4 124 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 ZNF236Q9UL36 1845 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 LILRA1O75019 489 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 LHBP01229 141 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 G6PC2Q9NQR9 355 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 SUMO4Q6EEV6 95 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 C19orf24Q9BVV8 132 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 KIF13BQ9NQT8 1826 aa13.7□□□□□ -0.22
RGP1-201ENST00000378078 A0A087WX48 190 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 PTPRZ1P23471 2315 aaPredicted RBP13.69□□□□□ -0.22
RGP1-201ENST00000378078 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.69□□□□□ -0.22
RGP1-201ENST00000378078 RPL32P62910 135 aaKnown RBP13.69□□□□□ -0.22
RGP1-201ENST00000378078 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
RGP1-201ENST00000378078 SAA2-SAA4A0A096LPE2 208 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 CD55P08174 381 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 SAA2P0DJI9 122 aaPredicted RBP13.69□□□□□ -0.22
RGP1-201ENST00000378078 SPACA3Q8IXA5 215 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 FAM181AQ8N9Y4 354 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 KLHL30-AS1Q8NEE0 82 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 LINC00477Q96M19 166 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms