RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 ATP5G3P48201 142 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 TCF24Q7RTU0 167 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 VOPP1Q96AW1 172 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 WFDC1Q9HC57 220 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 GRIFINA4D1Z8 144 aa16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 J3KRW8 73 aa16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 FOXH1O75593 365 aa16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 PF4V1P10720 104 aa16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 OR52E5Q8NH55 327 aa16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 HBBP68871 147 aa16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 ASCL4Q6XD76 172 aa16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 MRPL20Q9BYC9 149 aaKnown RBP16.33■□□□□ 0.2
TGFBR1-201ENST00000374990 SAA2-SAA4A0A096LPE2 208 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 SAA2P0DJI9 122 aaPredicted RBP16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 SPATA45Q537H7 98 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 NEU4Q8WWR8 484 aaPredicted RBP16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 REG4Q9BYZ8 158 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 B3GALT5-AS1P59052 145 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 PEAR1Q5VY43 1037 aaPredicted RBP16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 SSBP3Q9BWW4 388 aaPredicted RBP16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 A0A1B0GW64 132 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 C5orf63A6NC05 138 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 SNCGO76070 127 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 ZNF738Q8NE65 137 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 OR10AG1Q8NH19 301 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 CADP27708 2225 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 SCO2A0A1W2PP80 73 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 CCL20P78556 96 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 PLSCR4Q9NRQ2 329 aa16.32■□□□□ 0.2
TGFBR1-201ENST00000374990 PEX7O00628 323 aa16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 RAMP3O60896 148 aa16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 MGPP08493 103 aa16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 IL18BPO95998 194 aa16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 FBXL15Q9H469 300 aa16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 TMEM242Q9NWH2 141 aa16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 SOX21Q9Y651 276 aaPredicted RBP16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 LINC01560Q8TB33 94 aa16.31■□□□□ 0.2
TGFBR1-201ENST00000374990 IGHV1-18A0A0C4DH31 117 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 SAA1P0DJI8 122 aaPredicted RBP16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 SHANK1Q9Y566 2161 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 ANAPC1Q9H1A4 1944 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 LRRK1Q38SD2 2015 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 LOC389332A0A1B0GUA5 103 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 HLA-DRB1P01911 266 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 SGK494Q96LW2 274 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 ATG101Q9BSB4 218 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 FER1L5A0AVI2 2057 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 PLXNA4Q9HCM2 1894 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 A0A1W2PRE2 83 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 Q0VFX4 171 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 TBR1Q16650 682 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 MAP1LC3AQ9H492 121 aa16.3■□□□□ 0.2
TGFBR1-201ENST00000374990 FANCMQ8IYD8 2048 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 LYL1P12980 280 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 NPPCP23582 126 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 H3BTX0 84 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 CD55P08174 381 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 SRSF9Q13242 221 aaKnown RBP eCLIP16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 RNF144BQ7Z419 303 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 AP5S1Q9NUS5 200 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 FOXF2Q12947 444 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 SLC25A34Q6PIV7 304 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 REC114Q7Z4M0 266 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 TIMP3P35625 211 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 PRCDQ00LT1 54 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 RELQ04864 619 aaPredicted RBP16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 MIR17HGQ75NE6 70 aa16.29■□□□□ 0.2
TGFBR1-201ENST00000374990 TRBV24-1A0A075B6N3 115 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 GPR82Q96P67 336 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 RPUSD1Q9UJJ7 312 aaKnown RBP16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 NOTCH3Q9UM47 2321 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 SLC17A3O00476 420 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 CCL3L1P16619 93 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 CD69Q07108 199 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 TMEM70Q9BUB7 260 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 PSPNO60542 156 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 ANOS1P23352 680 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 TM4SF20Q53R12 229 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 MBNL2Q5VZF2 373 aaKnown RBP16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 MDS2Q8NDY4 140 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 EBLN2Q6P2I7 272 aa16.28■□□□□ 0.2
TGFBR1-201ENST00000374990 NOTCH4Q99466 2003 aa16.27■□□□□ 0.2
TGFBR1-201ENST00000374990 FAM106AQ4KMX7 169 aa16.27■□□□□ 0.2
TGFBR1-201ENST00000374990 DLX1P56177 255 aa16.27■□□□□ 0.19
TGFBR1-201ENST00000374990 EEF1AKMT3Q96AZ1 226 aa16.27■□□□□ 0.19
TGFBR1-201ENST00000374990 ZNF257Q9Y2Q1 563 aa16.27■□□□□ 0.19
TGFBR1-201ENST00000374990 TMEM14EPQ6UXP3 125 aa16.27■□□□□ 0.19
TGFBR1-201ENST00000374990 WFDC3Q8IUB2 231 aa16.27■□□□□ 0.19
TGFBR1-201ENST00000374990 C21orf62Q9NYP8 219 aa16.27■□□□□ 0.19
TGFBR1-201ENST00000374990 GFRA3O60609 400 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 Q6AWC8 147 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 HEPN1Q6WQI6 88 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 TMEM170AQ8WVE7 144 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 ELOVL1Q9BW60 279 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 COLCA2A8K830 154 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 RPL24P83731 157 aaKnown RBP16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 DPRXA6NFQ7 191 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 NMUP48645 174 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 PDLIM4P50479 330 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms