RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 AHRRA9YTQ3 701 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 ABHD12Q8N2K0 398 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 IMMP1LQ96LU5 166 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 TNRC6AQ8NDV7 1962 aaKnown RBP16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 ZNF716A6NP11 495 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 LINC00473A8K010 186 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 CYC1P08574 325 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 PPIAL4GP0DN37 164 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 COX6A1P12074 109 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 RNFT1Q5M7Z0 435 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 OR52E5Q8NH55 327 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 CT55Q8WUE5 264 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 POM121L2Q96KW2 1035 aa16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 MBNL3Q9NUK0 354 aaKnown RBP16.97■□□□□ 0.31
TMEFF1-201ENST00000374879 CACNA1DQ01668 2161 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 J3QW42 95 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 P04436 131 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 REG1BP48304 166 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 SSR4P51571 173 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 GTF2H5Q6ZYL4 71 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 JMJD8Q96S16 334 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 GCM1Q9NP62 436 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 HEYLQ9NQ87 328 aaPredicted RBP16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 C1RLQ9NZP8 487 aa16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 LSM4Q9Y4Z0 139 aaKnown RBP16.96■□□□□ 0.31
TMEFF1-201ENST00000374879 C21orf140B9A014 251 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 C9orf172C9J069 976 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 SNAI2O43623 268 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 HLA-DRB1P01911 266 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 CAMPP49913 170 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 PRSS57Q6UWY2 283 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 NUP35Q8NFH5 326 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 PRRG4Q9BZD6 226 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 ZNF355PQ9NSJ1 428 aa16.96■□□□□ 0.3
TMEFF1-201ENST00000374879 C9orf135Q5VTT2 229 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 TMEM108Q6UXF1 575 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 NEGR1Q7Z3B1 354 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 IGF2BP2-AS1Q96M15 143 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 NAA38Q9BRA0 125 aaKnown RBP16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 UQCRFS1P47985 274 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 RAC3P60763 192 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 IL11RAQ14626 422 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 RASL11AQ6T310 242 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 CDX2Q99626 313 aaPredicted RBP16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 TMEM191AQ9H0A3 160 aa16.95■□□□□ 0.3
TMEFF1-201ENST00000374879 IGHV1-24A0A0C4DH33 117 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 GGTLC3B5MD39 225 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 KLF7O75840 302 aaPredicted RBP16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 PPOXP50336 477 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 TMPRSS3P57727 454 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 SH2D2AQ9NP31 389 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 MED12LQ86YW9 2145 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 A0A096LPE4 126 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 A0A1W2PPZ6 126 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 LEPROTL1O95214 131 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 C2orf91Q6ZV80 131 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 TRIB1Q96RU8 372 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 KCNIP1Q9NZI2 227 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 OR51B2Q9Y5P1 312 aa16.94■□□□□ 0.3
TMEFF1-201ENST00000374879 OR2J3O76001 311 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 HAND1O96004 215 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 GNG3P63215 75 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 TAAR6Q96RI8 345 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 H0Y8G0 127 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 HBZP02008 142 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 CCL4P13236 92 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 CD24P25063 80 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 RPS19BP1Q86WX3 136 aaKnown RBP16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 UBALD2Q8IYN6 164 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 WFDC12Q8WWY7 111 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 GALMQ96C23 342 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
TMEFF1-201ENST00000374879 APOA2P02652 100 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 HTR1DP28221 377 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 LINC00479Q96M42 142 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 PMCHL2Q9BQD1 86 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 SH3BGRL2Q9UJC5 107 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 TNRC6BQ9UPQ9 1833 aaKnown RBP16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 CXCL13O43927 109 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 GFRA3O60609 400 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 VDAC2P45880 294 aaPredicted RBP16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 WIPI1Q5MNZ9 446 aaPredicted RBP16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 TEPPQ6URK8 271 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 ZNF503Q96F45 646 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 AP1S3Q96PC3 154 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 R4GN57 208 aa16.92■□□□□ 0.3
TMEFF1-201ENST00000374879 H3BUT2 72 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 FOXA3P55318 350 aaPredicted RBP16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 PET117Q6UWS5 81 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 SSX8Q7RTT4 187 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 MBD6Q96DN6 1003 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 ABI3Q9P2A4 366 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 TMEM265A0A087WTH1 108 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 C9orf118A6NHY6 69 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 C12orf77C9JDV5 145 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 K7EP34 96 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 RAB31Q13636 194 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 TMEM97Q5BJF2 176 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 TMEM167BQ9NRX6 74 aa16.91■□□□□ 0.3
TMEFF1-201ENST00000374879 ANKRD30BLA7E2S9 258 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms