RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 DMRT1Q9Y5R6 373 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 CENPVL3A0A0U1RRI6 287 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 hCG_1809904A0A1W2PP81 198 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 A0A1W2PR64 198 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 A0A1W2PRV1 198 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 CEBPZOSA8MTT3 80 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 F6UZH7 168 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 M0R1W7 72 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 RBFOX2O43251 390 aaKnown RBP eCLIP8.42□□□□□ -1.06
COL5A1-202ENST00000371820 PDE6DO43924 150 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 RHBDL1O75783 438 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 HPRT1P00492 218 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 IGKV1-39P01597 117 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 IGKV1-5P01602 117 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 IGKV1D-39P04432 117 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 AKR1C3P42330 323 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 NDUFA6P56556 154 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 OR2B8PP59922 312 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 RPL15P61313 204 aaKnown RBP8.42□□□□□ -1.06
COL5A1-202ENST00000371820 MEF2BQ02080 365 aaPredicted RBP8.42□□□□□ -1.06
COL5A1-202ENST00000371820 VWC2Q2TAL6 325 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 DEFB112Q30KQ8 113 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 NCR3LG1Q68D85 454 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 KCNIP4Q6PIL6 250 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 ACP7Q6ZNF0 438 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 CYP2G1PQ6ZSU1 146 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 VMO1Q7Z5L0 202 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 SDSLQ96GA7 329 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 CYYR1Q96J86 154 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 DUX5Q96PT3 197 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 IMMP2LQ96T52 175 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 ABHD14AQ9BUJ0 271 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF747Q9BV97 191 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 SRD5A3Q9H8P0 318 aa8.42□□□□□ -1.06
COL5A1-202ENST00000371820 A0A1B0GUS0 222 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 ZFP92A6NM28 416 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 HOXA3O43365 443 aaPredicted RBP8.41□□□□□ -1.06
COL5A1-202ENST00000371820 KBTBD11O94819 623 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 MT-CO2P00403 227 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 IGLV2-14P01704 120 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 FBP1P09467 338 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 RAB7AP51149 207 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 CEBPGP53567 150 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 RUNX1Q01196 453 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 TMEM267Q0VDI3 215 aaPredicted RBP8.41□□□□□ -1.06
COL5A1-202ENST00000371820 RAB31Q13636 194 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 BSXQ3C1V8 233 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 RUSC1-AS1Q66K80 236 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 DUX4L9Q6RFH8 374 aaPredicted RBP8.41□□□□□ -1.06
COL5A1-202ENST00000371820 SHISA2Q6UWI4 295 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 LCN15Q6UWW0 184 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 Q6YL49 198 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 ETV3LQ6ZN32 361 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 Q6ZRM9 215 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 C1orf122Q6ZSJ8 110 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 OR10A7Q8NGE5 316 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 OR10G9Q8NGN4 311 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 OR10G7Q8NGN6 311 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 DTD1Q8TEA8 209 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 SSMEM1Q8WWF3 244 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 ACY3Q96HD9 319 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 ADTRPQ96IZ2 230 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 SNX22Q96L94 193 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF488Q96MN9 340 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 PFDN5Q99471 154 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 PYGO2Q9BRQ0 406 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 GSN-AS1Q9NRJ2 163 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 DOK5Q9P104 306 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 OR1A1Q9P1Q5 309 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 JPT1Q9UK76 154 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
COL5A1-202ENST00000371820 IGKV1D-17A0A075B6S4 117 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 A0A0G2JRQ6 117 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 A0A1B0GV50 99 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 MDFIC2A0A1B0GVS7 189 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 YPEL1O60688 119 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 FCN3O75636 299 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 IFNA10P01566 189 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 HBZP02008 142 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 P0C879 139 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 IAPPP10997 89 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 SELLP14151 372 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 OR3A1P47881 315 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 SPCS3P61009 180 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 ERVK-16P61578 105 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 AARDQ4LEZ3 155 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 BATF2Q8N1L9 274 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.4□□□□□ -1.06
COL5A1-202ENST00000371820 Q8WTZ3 238 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 YPEL2Q96QA6 119 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 SMIM7Q9BQ49 75 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 RSG1Q9BU20 258 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 FAM234AQ9H0X4 552 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 IL36RNQ9UBH0 155 aa8.4□□□□□ -1.06
COL5A1-202ENST00000371820 TRAV9-1A0A075B6T8 112 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 A0A1W2PPV4 95 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 C12orf77C9JDV5 145 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 FNDC10F2Z333 226 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 MGST3O14880 152 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms