RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 NDUFA3O95167 84 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 LINC01590Q5TEZ4 76 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 ORMDL3Q8N138 153 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 RHOGP84095 191 aa13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 PRADC1Q9BSG0 188 aa13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 FABP5P3A8MUU1 101 aa13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 TRAV40A0A0B4J280 105 aa13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 NMBP08949 121 aa13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 PUSL1Q8N0Z8 303 aaKnown RBP13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 CHCHD5Q9BSY4 110 aa13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 PEF1Q9UBV8 284 aaKnown RBP13.18□□□□□ -0.3
NUCKS1-201ENST00000367142 SAA2-SAA4A0A096LPE2 208 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 ADARB2-AS1A8MUL3 147 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 SAA2P0DJI9 122 aaPredicted RBP13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 CBLN1P23435 193 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 UPK2O00526 184 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 RAMP1O60894 148 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 LTBRP36941 435 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 C11orf44Q8N8P7 122 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 PSCAO43653 123 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 WFDC6Q9BQY6 131 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 CCL3L1P16619 93 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 CELA3BP08861 270 aa13.17□□□□□ -0.3
NUCKS1-201ENST00000367142 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 EGR1P18146 543 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 TDGF1P3P51864 188 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 ERVK11-1P61568 191 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 CD200R1LQ6Q8B3 271 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 ZNF585BQ52M93 769 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 FAM166AQ6J272 317 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 MIR17HGQ75NE6 70 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 TRPM6Q9BX84 2022 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 A0A0G2JK05 382 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 DPRXA6NFQ7 191 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 OVOL1O14753 267 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 DTX1Q86Y01 620 aa13.16□□□□□ -0.3
NUCKS1-201ENST00000367142 CD33P20138 364 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 TMEM86BQ8N661 226 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 REPIN1Q9BWE0 567 aaKnown RBP13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 OR9G9P0C7N8 305 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 YPEL1O60688 119 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 CD28P10747 220 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 IMMP1LQ96LU5 166 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 YPEL2Q96QA6 119 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 SLC25A15Q9Y619 301 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 PRR32B1ATL7 298 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 LHX2P50458 406 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 PAX8Q06710 450 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 C20orf204Q6ZNR8 217 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 PLXNB2O15031 1838 aa13.15□□□□□ -0.3
NUCKS1-201ENST00000367142 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.31
NUCKS1-201ENST00000367142 IGLV3-19P01714 112 aa13.15□□□□□ -0.31
NUCKS1-201ENST00000367142 ZP1P60852 638 aa13.15□□□□□ -0.31
NUCKS1-201ENST00000367142 ASCL4Q6XD76 172 aa13.15□□□□□ -0.31
NUCKS1-201ENST00000367142 SCN1AP35498 2009 aa13.15□□□□□ -0.31
NUCKS1-201ENST00000367142 LOC102723996A0A087X1L8 192 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 FHITP49789 147 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 TRAV41A0A0B4J266 112 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 FAM169BQ8N8A8 192 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 APOMO95445 188 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 S100A7L2Q5SY68 101 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 PQLC2LA1A4F0 135 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.315e-8■■□□□ 12.3
NUCKS1-201ENST00000367142 MRPL14Q6P1L8 145 aaKnown RBP13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 WFIKKN1Q96NZ8 548 aa13.14□□□□□ -0.31
NUCKS1-201ENST00000367142 UCP1P25874 307 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 FBLN7Q53RD9 439 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 TRAV9-1A0A075B6T8 112 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 UMODP07911 640 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 SIGLEC15Q6ZMC9 328 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 SLC17A3O00476 420 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 EFNA4P52798 201 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 A0A1B0GWB2 263 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 PAX2Q02962 417 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 C1QL2Q7Z5L3 287 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 A0A087WX48 190 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 TNFRSF14Q92956 283 aa13.13□□□□□ -0.31
NUCKS1-201ENST00000367142 ZXDCQ2QGD7 858 aaPredicted RBP13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 CYSLTR1Q9Y271 337 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 C15orf61A6NNL5 157 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 CD5P06127 495 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 CNTRLQ7Z7A1 2325 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 FAM89BQ8N5H3 189 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 SEPSECSQ9HD40 501 aaKnown RBP13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 H2BFSP57053 126 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 PRB3Q04118 309 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms