RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 A0A1W2PQM1 296 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 H3BUT2 72 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 PLXNA2O75051 1894 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 A0A1B0GV72 72 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 FAM157AC9JC47 383 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 CKS2P33552 79 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 OR13A1Q8NGR1 328 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 SLC25A33Q9BSK2 321 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 TMEM42Q69YG0 159 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 ZADH2Q8N4Q0 377 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 RPEQ96AT9 228 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 UFC1Q9Y3C8 167 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 SPCS1Q9Y6A9 102 aa13.39□□□□□ -0.27
CLSTN1-201ENST00000361311 RPL11P62913 178 aaKnown RBP13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 TREML4Q6UXN2 200 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 ZNF497Q6ZNH5 498 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 GCSAMQ8N6F7 178 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 ZNF703Q9H7S9 590 aaPredicted RBP13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 IGLV3-12A0A075B6K2 115 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 SRSF9Q13242 221 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 NRN1LQ496H8 165 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 HCP5Q6MZN7 132 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 ZNF841Q6ZN19 808 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 CCL17Q92583 94 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 DCTN5Q9BTE1 182 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 GGTLC1Q9BX51 225 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 LOXL4Q96JB6 756 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 FNDC4Q9H6D8 234 aaPredicted RBP13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 OR2T8A6NH00 312 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 ST20Q9HBF5 79 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 RALYQ9UKM9 306 aaKnown RBP13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 RNF115Q9Y4L5 304 aa13.38□□□□□ -0.27
CLSTN1-201ENST00000361311 MPV17L2Q567V2 206 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 TMEM136Q6ZRR5 245 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 Q6ZWC4 215 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 COX11Q9Y6N1 276 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 CACNA1HO95180 2353 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 C7orf71A4D174 169 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 MYOZ3Q8TDC0 251 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 APOHP02749 345 aaPredicted RBP13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 THYN1Q9P016 225 aa13.37□□□□□ -0.27
CLSTN1-201ENST00000361311 TRAV30A0A087WSZ9 112 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 C9JCJ5 164 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 SMIM13P0DJ93 91 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 FOXC1Q12948 553 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 Q6ZS49 121 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 FBXL7Q9UJT9 491 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 PLXNB3Q9ULL4 1909 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 IGHV1-69-2A0A0G2JMI3 117 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 TMEM189A5PLL7 270 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 KLF7O75840 302 aaPredicted RBP13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 ASCL4Q6XD76 172 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 CRIM1Q9NZV1 1036 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 HILPDAQ9Y5L2 63 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 ATP5IP56385 69 aaPredicted RBP13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 GNG7O60262 68 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 ABCA1O95477 2261 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 HOXA4Q00056 320 aaPredicted RBP13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 SAMD13Q5VXD3 122 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 IFI27L2Q9H2X8 130 aa13.36□□□□□ -0.27
CLSTN1-201ENST00000361311 OR9G9P0C7N8 305 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 KIR2DL2P43627 348 aaPredicted RBP13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 TM4SF20Q53R12 229 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 RAB1CQ92928 201 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 ZNF414Q96IQ9 312 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 CCL13Q99616 98 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 SCNM1Q9BWG6 230 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 SLC25A10Q9UBX3 287 aaPredicted RBP13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 WNK2Q9Y3S1 2297 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 AKAP6Q13023 2319 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 ZNF716A6NP11 495 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 TCF24Q7RTU0 167 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 TRAV17A0A0B4J275 112 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 FAM181BA6NEQ2 426 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 NBEAP1P0C6P0 100 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 RPL30P62888 115 aaKnown RBP13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 HIST1H1AQ02539 215 aaPredicted RBP13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 TWIST1Q15672 202 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 SPATA31B1PQ5VZV4 182 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 ACP7Q6ZNF0 438 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 GOLT1AQ6ZVE7 132 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 LINC00305Q7Z4B0 112 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 GPR179Q6PRD1 2367 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 A0A0G2JMM0 328 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 A0A1W2PPB8 328 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 KIR3DP1A8MWS1 328 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 RPL27AP46776 148 aaKnown RBP13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 RBPJQ06330 500 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 Q0VG73 95 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 PRDM6Q9NQX0 595 aa13.35□□□□□ -0.27
CLSTN1-201ENST00000361311 COX7A1P24310 79 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 CX3CL1P78423 397 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 HES7Q9BYE0 225 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms