RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 TGFAP01135 160 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 IGHV4-38-2P0DP08 117 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 COMPP49747 757 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 ERHP84090 104 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 PLGLAQ15195 96 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 LRRC75BQ2VPJ9 315 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 BSXQ3C1V8 233 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 DPPA3Q6W0C5 159 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 ETV3LQ6ZN32 361 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 TMEM170AQ8WVE7 144 aa16.76■□□□□ 0.27
MAP1LC3A-201ENST00000360668 IGHV3OR16-10A0A075B7F0 116 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 CA2P00918 260 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 TMEM11P17152 192 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 RPL27AP46776 148 aaKnown RBP16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 TNXAQ16473 311 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 C10orf55Q5SWW7 151 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 MRPL41Q8IXM3 137 aaKnown RBP16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 OR10W1Q8NGF6 305 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 PSMG3Q9BT73 122 aaPredicted RBP16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 TMEM147Q9BVK8 224 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 GGACTQ9BVM4 153 aa16.75■□□□□ 0.27
MAP1LC3A-201ENST00000360668 C5orf64Q2M2E5 130 aa16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 VWC2Q2TAL6 325 aa16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 FBLN7Q53RD9 439 aa16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 C2orf83Q53S99 150 aa16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 Q6ZRG5 221 aa16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 MEGF9Q9H1U4 602 aa16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 SH3BGRL3Q9H299 93 aa16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 MAP1AP78559 2803 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3A-201ENST00000360668 A0A1B0GW64 132 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 PRSS46E5RG02 174 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 AVPP01185 164 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 IFNA4P05014 189 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 CAMLGP49069 296 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 SERF2P84101 59 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 KLF17Q5JT82 389 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 SLC25A24Q6NUK1 477 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 BRD3OSQ6XYD6 125 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 CENPVQ7Z7K6 275 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 FOXC2Q99958 501 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 UQCC1Q9NVA1 299 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 C1RLQ9NZP8 487 aa16.73■□□□□ 0.27
MAP1LC3A-201ENST00000360668 PRH1P02810 166 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 SNCAP37840 140 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 FAM120AOSQ5T036 256 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 HRH4Q9H3N8 390 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 TIMM9Q9Y5J7 89 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 A0A0U1RQK1 487 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 FCN1O00602 326 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 RNASE2P10153 161 aaKnown RBP16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 BPIFB3P59826 476 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 GNB1P62873 340 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 WT1-ASQ06250 92 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 SPNS3Q6ZMD2 512 aa16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 SRSF8Q9BRL6 282 aaKnown RBP16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 WDR61Q9GZS3 305 aaKnown RBP16.72■□□□□ 0.27
MAP1LC3A-201ENST00000360668 DLK1P80370 383 aa16.71■□□□□ 0.27
MAP1LC3A-201ENST00000360668 SSBP2P81877 361 aaPredicted RBP16.71■□□□□ 0.27
MAP1LC3A-201ENST00000360668 CYB5R2Q6BCY4 276 aa16.71■□□□□ 0.27
MAP1LC3A-201ENST00000360668 TMEM182Q6ZP80 229 aaPredicted RBP16.71■□□□□ 0.27
MAP1LC3A-201ENST00000360668 FAM96BQ9Y3D0 163 aa16.71■□□□□ 0.27
MAP1LC3A-201ENST00000360668 HIVEP1P15822 2718 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 UBE2L5PA0A1B0GUS4 154 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 IGLC7A0M8Q6 106 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 BTBD17A6NE02 478 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 NCBP2LA6PVI3 153 aaKnown RBP16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 TSPAN15O95858 294 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 OR13C7P0DN81 318 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SUB1P53999 127 aaKnown RBP eCLIP16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 TUSC1Q2TAM9 212 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 CCDC28AQ8IWP9 274 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 LFNGQ8NES3 379 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 WFDC11Q8NEX6 87 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SRSF12Q8WXF0 261 aaKnown RBP16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 LINC00052Q96N35 136 aa16.7■□□□□ 0.26
MAP1LC3A-201ENST00000360668 TEX22C9J3V5 150 aa16.69■□□□□ 0.26
MAP1LC3A-201ENST00000360668 AKR1C8PQ5T2L2 129 aa16.69■□□□□ 0.26
MAP1LC3A-201ENST00000360668 BPIFCQ8NFQ6 507 aa16.69■□□□□ 0.26
MAP1LC3A-201ENST00000360668 TAF15Q92804 592 aaKnown RBP eCLIP16.69■□□□□ 0.26
MAP1LC3A-201ENST00000360668 PRRC2AP48634 2157 aaKnown RBP16.69■□□□□ 0.26
MAP1LC3A-201ENST00000360668 FNDC10F2Z333 226 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 PLXNB1O43157 2135 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SOX15O60248 233 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 CNIH1O95406 144 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 FBP1P09467 338 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 MDKP21741 143 aaPredicted RBP16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 RUNX1Q01196 453 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 Q8N9W7 124 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 ZNF114Q8NC26 417 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 TMEM218A2RU14 115 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 ZNF562Q6V9R5 426 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 P2RX4Q99571 388 aa16.68■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SVEP1Q4LDE5 3571 aa16.67■□□□□ 0.26
MAP1LC3A-201ENST00000360668 CD5P06127 495 aa16.67■□□□□ 0.26
MAP1LC3A-201ENST00000360668 ZNF616Q08AN1 781 aa16.67■□□□□ 0.26
MAP1LC3A-201ENST00000360668 FXYD3Q14802 87 aa16.67■□□□□ 0.26
MAP1LC3A-201ENST00000360668 FAM213BQ8TBF2 198 aa16.67■□□□□ 0.26
MAP1LC3A-201ENST00000360668 PIFOQ8TCI5 191 aa16.67■□□□□ 0.26
MAP1LC3A-201ENST00000360668 RNASEH2CQ8TDP1 164 aaKnown RBP16.67■□□□□ 0.26
MAP1LC3A-201ENST00000360668 WDR83OSQ9Y284 106 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms